Detailed information on CNT30225612


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691482Hordeum vulgareOryza sativa20.7917.4392.8642forward
CNT30135452Hordeum vulgareLolium perenne49.526.9582100forward
CNT30592720Hordeum vulgareEragrostis curvula44.0631.0187.6489forward

Expression of CNT30225612

Peptides detected in this lncRNA

>peptide 1 (37 aa)
GKTLLGVELEEAALDASGLECLSGVHLLSVNSGRRRR*

>peptide 2 (66 aa)
MARPSLGLSLKKPPSMPAALNASAASTFFPSTVVAGGGDGAPEREAGADAGVDELGDGLEDLEADAG

>peptide 3 (46 aa)
MPQRRPPSFRQQWSPEAVMVPRSGRQGLTPVLMSLVMASRISKRMPE

Sequence

>CNT30225612
ATGGCAAGACCCTCCTTGGGGTTGAGCTTGAAGAAGCCGCCCTCGATGCCAGCGGCCTTGAATGCCTCAGCGGCGTCCACCTTCTTTCCGTCAACAGTGG
TCGCCGGAGGCGGTGATGGTGCCCCGGAGCGGGAGGCAGGGGCTGACGCCGGTGTTGATGAGCTTGGTGATGGCCTCGAGGATCTCGAAGCGGATGCCGG
AG