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Detailed information on CNT30691482


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0DZE0|PAL2_ORYSJ, E-value = 9e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30225612Oryza sativaHordeum vulgare17.4320.7992.8642forward
CNT30239051Oryza sativaBrassica oleracea28.6310.989.8669forward
CNT3082373Oryza sativaBrassica juncea28.634.6888.4169forward
CNT30135452Oryza sativaLolium perenne41.9127.2286.14101forward
CNT30680825Oryza sativaTriticum urartu49.7923.6284.17120forward
CNT30364646Oryza sativaSorghum bicolor52.2811.4892.86126forward
CNT30358787Oryza sativaLactuca sativa29.8819.3586.1172forward
CNT30321993Oryza sativaAsparagus officinalis25.7315.0993.5562forward
CNT30592720Oryza sativaEragrostis curvula46.4739.0294.64112forward

Expression of CNT30691482

Peptides detected in this lncRNA

>peptide 1 (30 aa)
WCNRHGVLAPSDKAGNVGQRDEVTGAAGTV*

Sequence

>CNT30691482
TGGTGCAACCGCCACGGCGTTCTCGCGCCCAGTGACAAGGCCGGCAATGTAGGACAGCGGGACGAGGTCACCGGAGCGGCAGGCACGGTGTGACGTTCGC
GTTGAGCAGCTTGGCGATCGCCTCGAGGATCTCGAACCGGATGCCGGAGTATCCCTGGAGGAGTGTGTTGATGCGGACGAGCATTGCCGCGCGGGTTGCC
TCCGCCGGCAAAACATGACCGTCGGTGCCAGTGCCGAACGC