Detailed information on CNT30592720


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VXG7|PALY_MAIZE, E-value = 3e-54

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691482Eragrostis curvulaOryza sativa39.0246.4794.64112forward
CNT30225612Eragrostis curvulaHordeum vulgare31.0144.0687.6489forward
CNT30239051Eragrostis curvulaBrassica oleracea21.259.6488.5261forward
CNT30135452Eragrostis curvulaLolium perenne50.5239.0886.9145forward
CNT30680825Eragrostis curvulaTriticum urartu63.0735.6383.43181forward
CNT30358787Eragrostis curvulaLactuca sativa28.9222.3184.3483forward
CNT30321993Eragrostis curvulaAsparagus officinalis49.4834.5584.51142forward

Expression of CNT30592720

Peptides detected in this lncRNA

>peptide 1 (44 aa)
PSLGFSLKKPPSMPAILNASAASTFLPSTVVACAFGRPVMRPAM*

>peptide 2 (94 aa)
TFLGVQLEEAALDAGDLERLGGVNLPAVHGGGLRVRAPGDETGNVGQGNKVSGRGDRAAERQARRDVGVEQLGDGLEDLEADSGVSLEEGVDADE

Sequence

>CNT30592720
ACCTTCCTTGGGGTTCAGCTTGAAGAAGCCGCCCTCGATGCCGGCGATCTTGAACGCCTCGGCGGCGTCAACCTTCCTGCCGTCCACGGTGGTGGCCTGC
GCGTTCGGGCGCCCGGTGATGAGACCGGCAATGTAGGACAGGGGAACAAGGTCTCCGGACGCGGTGATCGTGCCGCGGAGCGGCAGGCACGGCGTGACGT
TGGCGTTGAGCAGCTTGGCGATGGCCTCGAGGATCTCGAAGCGGATTCCGGAGTATCCCTGGAGGAGGGTGTTGATGCGGACGAGCA