Detailed information on CNT30131950


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672312Lolium perenneSetaria viridis34.3838.1891.48176forward
CNT30386911Lolium perenneTriticum turgidum86.9195.0986.07445forward
CNT30562744Lolium perenneActinidia chinensis20.3116.7585.58104forward
CNT30436840Lolium perenneAegilops tauschii80.08101.2384.39410forward
CNT30454075Lolium perenneSaccharum spontaneum32.0317.9692.68164forward
CNT30338967Lolium perenneEragrostis tef34.5736.2793.22177forward
CNT30577064Lolium perenneOryza barthii27.5418.4689.36141forward

Expression of CNT30131950

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MSRRGRAASPGPARRCAGTRCSRSPAPRSR*

>peptide 2 (32 aa)
LLHIVILTYHLCNRKTIKKEEDSSRSMYKWMH*

Sequence

>CNT30131950
CCCTTTTGCACATCGTGATTCTAACATATCATCTTTGTAATCGCAAAACAATAAAGAAAGAAGAAGACAGCTCAAGATCGATGTACAAGTGGATGCATTA
GGTCACCATTGGTTCATATTTTACAAATCTCCAAGTCCCAGCAGCTGTCCTATGTAATCAGACCTGCATTAATCAACAAAGGATCTTTTGCGGTACTCTC
TCTCATCGCTCGTCACACAAAACGAAACCACGTTCTTACAAGGACGCGTTCGTCCATTTTTGCAGCCGAGCTGACAGAAGCGTATACACTGCTCGACGAC
CGAGACCGGCCGCGCGCTTAAGAGGAGCCGAGGGTGTCGAAGATGGTGGTGCCCAGCGGGTCGAAGTATGAGCCGCCGGGGTAGAGCCGCCTCTCCGGGT
CCAGCTCGGCGTTGCGCTGGAACTCGATGTAGCCGATCACCAGCACCTCGATCCAGATGAGCGTCGTGATCGTGAATGGCAGCGGCTGGCCCAGGTACGA
CGAGCCGTCAAT