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Detailed information on CNT30386911


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9XF88|CB4B_ARATH, E-value = 2e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30436840Triticum turgidumAegilops tauschii85.6899.0198401forward
CNT30131950Triticum turgidumLolium perenne95.0986.9186.07445forward
CNT30556512Triticum turgidumPanicum hallii41.2439.7990.16193forward

Expression of CNT30386911

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYPITSTSIQINVVSVNGSGCPRYDDPSTSS

>peptide 2 (41 aa)
MVVCSGSLRSHRGRASSPGPAPRCAGTRCTRSPAPRSRSTW*

Sequence

>CNT30386911
ATTTTTGTAATCGCAAAAACGAAACAAAAGATTAGCTCAAGATTGATGTACAAGTGGATGCATTAAGTCACCATTGGTTCATATTTTACAAATCACCAAG
TCCCAGCAGCTCTCCTATGTGATCAGACCTGCATTAATCAACAAAGGATCTTTGCGATACCCTCTCATCCATCACTCGTCATACAAAACCAAAGCACGTT
CGTACACTGACGCGCGTTCGTCCATTTTGCAGCTGAGCTGACAGAAATTGCTCGACCACCGACCACTTAAGAGGAGCCGAAGGTGTCGAAGATGGTGGTG
TGCAGCGGGTCGCTGAGGAGCCACCGGGGTAGAGCCTCCTCTCCGGGTCCAGCTCCGCGTTGCGCTGGAACTCGATGTACCCGATCACCAGCACCTCGAT
CCAGATCAACGTGGTGAGCGTGAACGGCAGCGGCTGCCCCAGGTACGACGACCCGTCCACCAGCTCCA