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Detailed information on CNT3019796


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT82|MPC_ARATH, E-value = 3e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30616950Citrullus lanatusSesamum indicum17.6623.3384.6998forward
CNT30629284Citrullus lanatusVigna unguiculata11.1721.0987.162forward
CNT3013060Citrullus lanatusZea mays18.9233.0283.81105forward
CNT30128674Citrullus lanatusCorymbia citriodora9.7322.7888.8954forward
CNT3035726Citrullus lanatusCucumis melo39.6455.2893.18220forward
CNT3051227Citrullus lanatusCucumis sativus39.2847.2989.91218forward

Expression of CNT3019796

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MEQRTCLQQHQAWEDQAVHVQEDNGRHVLL

>peptide 2 (51 aa)
FHNAFEVLMKVKRFTTKLKHRVPTIIASNRNHHSVRTKIVELRISKCVNKK*

Sequence

>CNT3019796
CTTCCATAACGCATTTGAAGTGTTAATGAAAGTAAAACGCTTCACAACAAAACTTAAGCATAGGGTTCCCACAATCATTGCCAGTAATAGAAATCATCAC
TCGGTTCGAACAAAAATAGTTGAACTTCGCATCTCAAAGTGTGTCAATAAAAAGTAGCACCAAGTAAAAAGGTTCGCGGCTCATGAAAAACAGAAGGGGT
TGCCAACATTCAGATTTAGGAATCAAGGTTGTCAGTCAGAGATAGTGAAGCCAATTGATCAGCTGCATTGCCAGTCTGCTGAGCGACACTTCTTAAAACC
TCCATCGCCTCCGCCACCTTGGCTTTCAGAGCTTCAGGCGACTCCAGCAAGTGAAGAACCTCAGTTTGGTCCATTTCCAATAGCATTCCTGTTACCTTGG
CCGCATTATCAGGAACTGGTTGAGGGTGGACTGCATCCCGCGGTGGCATTCCACCCATCTCATATGGAACAGAGAACATGCCTCCAGCAACACCAGGCAT
GGGAAGATCAGGCAGTCCACGTCCAGGAGGATAACGGTAGACACGTCCTCTTGGT