Detailed information on CNT30117133


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697688Oryza nivaraOryza sativa27.317.2398.8486forward
CNT30255788Oryza nivaraAvena sativa24.7616.3291.0378forward
CNT30663631Oryza nivaraTriticum dicoccoides27.319.3398.8486forward
CNT30231759Oryza nivaraAnanas comosus22.2215.529070forward
CNT30685285Oryza nivaraTriticum urartu27.34.2296.5186forward
CNT30341811Oryza nivaraEragrostis tef24.765.2988.4678forward
CNT30578381Oryza nivaraOryza barthii27.36.998.8486forward

Expression of CNT30117133

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MNEFWGDGFLINGSPSLPFSFLFWFVYLII

>peptide 2 (49 aa)
LVLVGGVDVEAVVVDADAVIGVAGGDGDLEGGGEDAGGGGIGEEKRGGN*

Sequence

>CNT30117133
GCTGGTACTTGTAGGAGGCGTAGACGTCGAGGCGGTCGTAGTAGACGCCGACGCGGTCATTGGGGTTGCGGGAGGCGACGGTGACCTGGAGGGCGGTGGA
GAGGACGCCGGAGGTGGAGGAATTGGAGAGGAGAAGAGAGGAGGAAATTGAGTTGGAATGGAAATGTGAAGAGAGAGATAGAGAGAGGGAGAGTGAGGTG
GCCGTTTGGGAATGTGAATGTGAATGAATGAATTTTGGGGAGATGGATTCTTAATAAATGGGTCACCCTCTCTCCCTTTTTCTTTTCTTTTTTGGTTTGT
TTATTTGATTATTTT