Detailed information on CNT30709355


BLAST search results

BLAST vs Swiss-Prot:
sp|P27521|CA4_ARATH, E-value = 3e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675752Glycine maxSetaria viridis18.121.6986.51126forward
CNT30631290Glycine maxVigna unguiculata28.8862.2392.04201forward
CNT30300292Glycine maxTriticum aestivum12.9335.0292.2290forward
CNT30554639Glycine maxOryza glaberrima15.5240.7589.81108forward
CNT30596737Glycine maxOryza meridionalis31.1835.6982.49217forward
CNT30103189Glycine maxOryza rufipogon11.7835.3490.2482forward

Expression of CNT30709355

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MMVLCHGSERCCNRCKVQGVKHTTRVSTLMLGQAVLLEDGVLVDRARVLDVLPSPDLDVVEQDELDHKEGRR*

>peptide 2 (76 aa)
MIPILVKTSGSSIPATPNMAQRHPIGLIVTSRLSLPEEPVRNLDFEAHGRKIAAEAWVVTVAMVVTHWQWQGRNFKK

>peptide 3 (47 aa)
MPKSLSKFIHSGLHEKDTGLSMSLDTNLVATNCIDDGVVPRVREVLQ*

Sequence

>CNT30709355
TATCATGCTTGATTACTGATTGATGGACAGTCTAAATAACAATGTAAAACCATCGTAGTTCCTCTGTACATGAAAATAGACGGATCATAACAATCATGCC
CAAATCACTCTCAAAATTCATCCATTCAGGATTACACGAGAAGGACACAGGCTTATCCATGTCATTGGATACAAACTTAGTAGCCACGAATTGTATTGAT
GATGGTGTTGTGCCACGGGTCAGAGAGGTGCTGCAATAGGTGCAAAGTTCAAGGGGTTAAACACACTACCAGGGTATCCACACTCATGTTGGGGCAAGCT
GTATTGCTTGAAGATGGGGTCTTGGTTGACAGAGCCAGGGTTCTTGATGTCCTGCCATCTCCGGATCTCGACGTAGTGGAACAAGATGAACTCGATCACA
AAGAGGGTCGACGATGAAGCAAAGTACTCCGATTTCCCAGCATCATACCATTGAGGGGCATTGATGATTCCAATCTTGGTGAAAACCTCAGGAAGTAGCA
TTCCTGCAACACCCAACATGGCCCAACGGCACCCCATTGGCCTCATAGTCACTTCCCGGTTGAGTTTACCGGAAGAGCCGGTCAGAAACCTCGATTTCGA
GGCACATGGCCGGAAAATCGCGGCGGAGGCTTGGGTTGTGACGGTGGCCATGGTGGTGACACACTGGCAGTGGCAAGGAAGAAATTTTAAGAAAAC