SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 3407 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30510003 Solanum lycopersicum 6:24045070-24048947 (-) noncoding (-0.012288)- 43 13.46 2
CNT30510001 Solanum lycopersicum 6:36934925-36937239 (+) noncoding (-0.077824)- 59 303.72 2
CNT30510000 Solanum lycopersicum 6:3271203-3279184 (+) noncoding (-0.086016)- 46 2.15 2
CNT30509999 Solanum lycopersicum 6:46670182-46671092 (+) noncoding (-0.0004096)- 44 83.68 1
CNT30509998 Solanum lycopersicum 6:38836581-38837086 (-) noncoding (-0.0004096)- 41 23.45 2
CNT30509997 Solanum lycopersicum 6:32613959-32614912 (+) noncoding (-0.028672)- 75 32.19 1
CNT30509996 Solanum lycopersicum 6:49717561-49719638 (+) noncoding (-0.110592)1e-24 (sp|Q42920|PME_MEDSA) 59 1242.2 3
CNT30509995 Solanum lycopersicum 6:39889282-39889623 (-) noncoding (-0.0237568)- 33 31.24 2
CNT30509994 Solanum lycopersicum 6:48864689-48866040 (+) noncoding (-0.0253952)- 80 51.65 3Conserved counterparts:
CNT30509993 Solanum lycopersicum 6:17817339-17820290 (-) noncoding (-0.0004096)- - 5.28 2
CNT30509992 Solanum lycopersicum 6:8542949-8545232 (+) noncoding (-0.0049152)- 69 9.76 2
CNT30509991 Solanum lycopersicum 6:49718091-49719638 (+) noncoding (-0.106496)0.0000000000001 (sp|Q3E9D3|PME55_ARATH) 64 117.3 2Conserved counterparts:
CNT30509989 Solanum lycopersicum 6:21938832-21941368 (+) noncoding (-0.0004096)- 82 27.55 1
CNT30509988 Solanum lycopersicum 6:27932410-27938467 (+) coding (0.044)- 89 2.66 2
CNT30509987 Solanum lycopersicum 6:40567032-40567869 (+) noncoding (-0.0004096)- 54 1.02 2
CNT30509986 Solanum lycopersicum 6:16850206-16860997 (+) coding (0.048)- 95 12.68 3
CNT30509985 Solanum lycopersicum 6:24872751-24873132 (-) noncoding (-0.0004096)- 32 31.34 1
CNT30509984 Solanum lycopersicum 6:683710-689588 (+) noncoding (-0.0303104)- 34 36.18 2
CNT30509983 Solanum lycopersicum 6:42765947-42767155 (+) noncoding (-0.0004096)- - 17.19 2
CNT30509982 Solanum lycopersicum 6:48370826-48377701 (+) noncoding (-0.0004096)5e-41 (sp|F1B282|C4H1_PETHY) 51 330.35 2
CNT30509981 Solanum lycopersicum 6:25540920-25545678 (+) noncoding (-0.0004096)- 64 12.6 2
CNT30509980 Solanum lycopersicum 6:943996-947930 (-) coding (0.06)- 49 0.18 6
CNT30509979 Solanum lycopersicum 6:21049428-21051160 (-) noncoding (-0.0004096)- 74 44.68 1
CNT30509978 Solanum lycopersicum 6:942884-947930 (-) noncoding (-0.053248)- 50 59.07 4
CNT30509977 Solanum lycopersicum 6:19221197-19228337 (-) noncoding (-0.012288)- 64 5.69 3
CNT30509976 Solanum lycopersicum 6:46002192-46002815 (-) noncoding (-0.04096)4e-30 (sp|Q9LUI1|LRX6_ARATH) 53 4.8 3
CNT30509975 Solanum lycopersicum 6:31594132-31595411 (+) noncoding (-0.069632)- 66 9.9 2
CNT30509974 Solanum lycopersicum 6:43189535-43191455 (+) noncoding (-0.0004096)- 32 24.09 2
CNT30509973 Solanum lycopersicum 6:39306042-39308452 (+) noncoding (-0.053248)- 65 5.56 1
CNT30509972 Solanum lycopersicum 6:13912278-13912581 (-) noncoding (-0.0004096)- 45 0.47 1
CNT30509971 Solanum lycopersicum 6:7606869-7609087 (+) coding (0.086)- 44 27.93 3
CNT30509970 Solanum lycopersicum 6:37775990-37785372 (-) noncoding (-0.02048)- 46 3.77 3
CNT30509969 Solanum lycopersicum 6:27932260-27940052 (+) coding (0.044)- 82 5.88 3
CNT30509968 Solanum lycopersicum 6:48864689-48866009 (+) noncoding (-0.0155648)- 80 18.77 3Conserved counterparts:
CNT30509967 Solanum lycopersicum 6:47487075-47488813 (+) noncoding (-0.0004096)- 59 9.09 2
CNT30509966 Solanum lycopersicum 6:18926038-18931353 (-) noncoding (-0.045056)- 75 6.9 4
CNT30509965 Solanum lycopersicum 6:40462797-40463231 (+) noncoding (-0.0106496)- 72 1.97 2
CNT30509964 Solanum lycopersicum 6:17023316-17037786 (+) noncoding (-0.0360448)2e-20 (sp|P31843|RRPO_OENBE) 75 54.05 2
CNT30509963 Solanum lycopersicum 6:42586936-42587192 (-) noncoding (-0.0004096)4e-27 (sp|Q7XAD0|HSY1_SOLLC) 51 12.1 2
CNT30509962 Solanum lycopersicum 6:23693018-23693708 (-) noncoding (-0.0004096)- 33 3.73 2
CNT30509960 Solanum lycopersicum 6:41790424-41791431 (-) noncoding (-0.0004096)- 31 32.12 2
CNT30509959 Solanum lycopersicum 6:12345392-12346420 (+) noncoding (-0.110592)- 46 1170.73 1Conserved counterparts:
CNT30509958 Solanum lycopersicum 6:37775990-37785372 (-) noncoding (-0.02048)- 46 6.33 3
CNT30509957 Solanum lycopersicum 6:42779150-42780417 (-) noncoding (-0.0004096)3e-50 (sp|Q2MIE8|RK22_SOLBU) 75 255.17 1Conserved counterparts:
CNT30509956 Solanum lycopersicum 6:27932382-27940075 (+) coding (0.044)- 78 9.33 2
CNT30509955 Solanum lycopersicum 6:250052-250287 (-) noncoding (-0.0004096)- 78 20.34 1
CNT30509954 Solanum lycopersicum 6:452187-452519 (+) noncoding (-0.0004096)- 45 86.57 1
CNT30509953 Solanum lycopersicum 6:36223898-36225536 (+) coding (0.04)- 43 1.3 2
CNT30509952 Solanum lycopersicum 6:32914071-32915482 (-) noncoding (-0.0004096)- 44 19.64 2Conserved counterparts:
CNT30509951 Solanum lycopersicum 6:42551287-42552053 (-) noncoding (-0.14336)- 48 42.44 2