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Detailed information on CNT30326143


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639890Asparagus officinalisNymphaea colorata58.9377.1496.641815forward
CNT30318212Asparagus officinalisCorylus avellana59.0367.6397.141818reverse complement
CNT30702609Asparagus officinalisQuercus lobata58.8698.5396.971813forward
CNT30283192Asparagus officinalisChenopodium quinoa59.1686.5197.151822reverse complement
CNT3021658Asparagus officinalisCitrullus lanatus57.73100.1797.471778reverse complement
CNT30628671Asparagus officinalisVigna unguiculata59.0362.296.811818reverse complement
CNT30200773Asparagus officinalisPisum sativum59.0361.8896.921818forward
CNT30506608Asparagus officinalisNicotiana attenuata59.0370.7495.651818forward
CNT3047196Asparagus officinalisPrunus dulcis59.0376.196.531818forward
CNT30638988Asparagus officinalisCapsicum annuum58.4794.5497.221801reverse complement
CNT30309180Asparagus officinalisTriticum aestivum59.2274.9195.721824forward
CNT30544406Asparagus officinalisBrassica napus58.9991.1796.751817forward
CNT30309594Asparagus officinalisCamelina sativa58.7793.6996.911810reverse complement
CNT3083352Asparagus officinalisBrassica juncea58.9998.9796.811817reverse complement
CNT30139291Asparagus officinalisLolium perenne59.2958.2395.731826reverse complement
CNT30422282Asparagus officinalisPapaver somniferum59.0657.6496.761819reverse complement
CNT3025914Asparagus officinalisPopulus trichocarpa58.41100.2897.171799forward
CNT3036478Asparagus officinalisCucumis melo57.6958.4597.361777forward
CNT30585666Asparagus officinalisEchinochloa crusgalli57.410096.441768reverse complement
CNT30557558Asparagus officinalisPanicum hallii59.2958.1396.171826forward

Expression of CNT30326143

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MTLNAVYSTLSQSGACKEPMPTGVQERPRTTTPGQAGPPAEFKHINKRRRRNLQGFPYWAIPGSLAVTRGILVSFFSSAY*

>peptide 2 (34 aa)
MLKLSGWPRLTWGRGPRAFLNARRHGLLARAALA*

>peptide 3 (37 aa)
MGQGAIGPFCPSHPQHPQALASRRRPDRYENPTTVRSR

>peptide 4 (43 aa)
MIRFSGLLATSRAANRPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 5 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPLNHYSDPEGQHNRTEIL*

>peptide 6 (30 aa)
MMRRRHEGLAIRRVIMNHQSTGQSPRWPFI*

>peptide 7 (31 aa)
MVHGILQFTPSIAFRYVLHRCESQDIRCQES*

>peptide 8 (32 aa)
MKYECPRLSLLIITPIPKANTIGPKSCDVIPC*

>peptide 9 (68 aa)
IDLPCLAARRVEMIVAGRVGHGEWWTDTNDAERCVLDPKPKRRVQGAHADGRSRTPSDHDPRSGGATR*

>peptide 10 (55 aa)
MHPFRKSGFFARISSRITTVIRVACTIKQTITDLMSHSQFHSLNLFILTHAWLNL*

>peptide 11 (77 aa)
MTPRQACPRPSSLGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAKISVAKSRKVHGMITGPHRAPPRWAMQHTVIL*

>peptide 12 (71 aa)
MTTGRINQVALPRRHSHRQIPPISCCTSAGKNGRIWRAERRSPLGKPIRNRQWDKGPLALFALRIHNIRKH*

>peptide 13 (82 aa)
MGSLHAPLWLRVEYTAFSVICVCPPFAVSDPTSDNHFNPPRRKAREVNLRIRAAASQCYGLGRRGALSDVRHDAQAGVPSAK*

Sequence

>CNT30326143
GATTGACCTCCCGTGCCTTGCGGCGCGGCGGGTTGAAATGATTGTCGCTGGTCGGGTCGGACACGGCGAATGGTGGACAGACACAAATGACGCTGAACGC
TGTGTACTCGACCCTAAGCCAAAGCGGCGCGTGCAAGGAGCCCATGCCGACGGGCGTTCAAGAACGCCCTCGGACCACGACCCCAGGTCAGGCGGGGCCA
CCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAGAAGAAACTTACAAGGATTCCCCTACTGGGCTATTCCCGGTTCGCTCGCCGTTACTAGGGGAATCC
TTGTAAGTTTCTTCTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTGGCCCCGCCTGACCTGGGGTCGTGGTCCGAGGGCGTTCTTGAACGCCCGTC
GGCATGGGCTCCTTGCACGCGCCGCTTTGGCTTAGGGTCGAGTACACAGCGTTCAGCGTCATTTGTGTCTGTCCACCATTCGCCGTGTCCGACCCGACCA
GCGACAATCATTTCAACCCGCCGCGCCGCAAGGCACGGGAGGTCAATCTCCGCATCCGCGCCGCCGCTTCCCAATGCTATGGCCTTGGGAGGCGGGGGGC
GCTGAGCGATGTGAGGCATGACGCCCAGGCAGGCGTGCCCTCGGCCAAGTAGCCTCGGGCGCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTG
CAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCAAGAGTCGTAAAGTTCATGGTATGATTACCGGA
CCACATCGTGCGCCGCCTCGATGGGCGATGCAGCACACGGTGATCCTCTAAAGCACTAGTCCTTGGCGCCCACCGCGCCGGGTATTGTTCCCACCGCCCG
TTCTGCAACGAGGCAGGACGGGGGCGGCCATAGGTGCCCAAGGAGGCCGGGGTAAGCGACAGATGTCGCCTTCCCTCGGATCTCCCGGACGGGTTTACTA
GTTCACGGTCGTCCGCTCGGGTCTCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAG
TGGACTTCTCGCGACGTCACGAGCGGCGAACCGCCCCCGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTA
CAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATG
AAATTTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACA
GACCTGTTATTGCCTCAAACTTCCGTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGATGCCTCCGCGTAGCTAGTTAGCAGGCTGA
GGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGT
CAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAG
TTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTAAAAGCAACATCCGCCGATCCCTGGTCG
GCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAG
TTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTCTTAATCATTACTCCGATCCCGAAGGCCAAC
ACAATAGGACCGAAATCCTGTGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGGCGCCGGAG
GCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGACGAGACAGCCGGTACACACCCTAGGGCGGACCGGCCGACCCAGCCCAAGGTC
CAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGT
TAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTG
CGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCT
CTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCTTGCGATCCGTCGAGTTATCATGAATCATCAGAGCAC
CGGGCAGAGCCCGCGTTGGCCTTTTATCTAATAAATGCATCCCTTCCGAAAGTCGGGTTTTTTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGA
GTAGCATGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTTGTTCATACTTACACATGCATGGCTTAATCTTT
GAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCACTCCCTAGGAGACACTCGCACCGCCAAATCCCCCCAATTTCTTGCTGCACAAGTGCAGG
TAAGAACGGGCGGATCTGGCGAGCGGAGCGTCGTTCACCCTTAGGAAAACCGATTCGTAACCGACAATGGGACAAGGGGCCATTGGCCCTTTTTGCCCTT
CGCATCCACAACATCCGCAAGCACTAGCGAGTCGTCGAAGGCCCGATCGATACGAAAATCCAACAACGGTTCGATCGAGG