SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 6775 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30377881 Arabidopsis thaliana 5:21112249-21112719 (-) noncoding (-0.1024)- 53 0 2
CNT30377880 Arabidopsis thaliana 5:15585399-15589494 (-) noncoding (-0.250266)9e-79 (sp|Q9FMA8|GL111_ARATH) 51 3.68 2
CNT30377879 Arabidopsis thaliana 5:2959999-2961241 (+) coding (0.119)1e-70 (sp|Q9LXB8|PLPK1_ARATH) 32 0.46 4
CNT30377878 Arabidopsis thaliana 5:25346729-25348386 (-) noncoding (-0.0290816)0 (sp|Q94BR1|MRF1_ARATH) 59 1.24 2
CNT30377877 Arabidopsis thaliana 5:5012367-5013135 (-) noncoding (-0.049152)- 41 4.96 1
CNT30377876 Arabidopsis thaliana 5:771900-772424 (+) coding (0.108)2e-38 (sp|Q1EC66|UBQ3_ARATH) 74 4.59 2Conserved counterparts:
CNT30377875 Arabidopsis thaliana 5:17756365-17757456 (+) noncoding (-0.02048)5e-77 (sp|Q02498|CRU1_RAPSA) 66 132.76 2
CNT30377873 Arabidopsis thaliana 5:23367818-23368394 (-) noncoding (-0.0004096)- 52 0.64 1
CNT30377872 Arabidopsis thaliana 5:23577476-23577716 (-) noncoding (-0.0004096)- 45 5.44 1
CNT30377871 Arabidopsis thaliana 5:19452248-19453371 (-) noncoding (-0.0004096)- 69 11.99 3
CNT30377870 Arabidopsis thaliana 5:24261874-24262509 (-) noncoding (-0.176128)6e-78 (sp|Q9LSR9|LRK18_ARATH) 51 3.64 2
CNT30377869 Arabidopsis thaliana 5:21170058-21172163 (-) noncoding (-0.0004096)3e-33 (sp|Q9FJ82|DAPB3_ARATH) 32 1.56 4
CNT30377867 Arabidopsis thaliana 5:13389110-13389342 (-) noncoding (-0.0004096)- - 4.82 1
CNT30377866 Arabidopsis thaliana 5:2346145-2346671 (-) noncoding (-0.0004096)- 39 5.38 2
CNT30377865 Arabidopsis thaliana 5:1876406-1876610 (+) noncoding (-0.006144)- 41 14.77 1
CNT30377864 Arabidopsis thaliana 5:8217686-8218320 (-) noncoding (-0.0004096)- 61 18.43 2
CNT30377863 Arabidopsis thaliana 5:24661838-24662745 (+) noncoding (-0.004096)- 30 2.19 2
CNT30377862 Arabidopsis thaliana 5:23552836-23553392 (-) coding (0.086)- 30 0.65 2
CNT30377861 Arabidopsis thaliana 5:9165938-9166595 (+) noncoding (-0.12288)- 55 6.36 1
CNT30377860 Arabidopsis thaliana 5:17879524-17879967 (+) noncoding (-0.0638976)5e-38 (sp|Q9FKV0|BBE24_ARATH) 77 1.46 2
CNT30377859 Arabidopsis thaliana 5:5169990-5178226 (+) coding (0.018)3e-178 (sp|O50055|COL1_ARATH) 74 1.01 9Conserved counterparts:
CNT30377858 Arabidopsis thaliana 5:4796572-4800717 (-) noncoding (-0.0278528)- 84 11.88 2
CNT30377857 Arabidopsis thaliana 5:13908325-13908591 (+) noncoding (-0.0004096)- 31 13.78 1
CNT30377856 Arabidopsis thaliana 5:21205973-21206172 (-) noncoding (-0.0004096)- - 3.15 1
CNT30377855 Arabidopsis thaliana 5:23994334-23994851 (+) noncoding (-0.0200704)- - 2.4 3Conserved counterparts:
CNT30377854 Arabidopsis thaliana 5:4799227-4800718 (-) noncoding (-0.0278528)- 84 110.14 2
CNT30377853 Arabidopsis thaliana 5:26508510-26508740 (-) noncoding (-0.0004096)- 43 0 1
CNT30377852 Arabidopsis thaliana 5:9121015-9121313 (-) coding (0.224)- 99 0.29 1
CNT30377851 Arabidopsis thaliana 5:9938725-9938936 (+) noncoding (-0.0004096)- 52 6.52 1
CNT30377850 Arabidopsis thaliana 5:15526742-15527147 (+) noncoding (-0.0090112)- 87 1.19 1
CNT30377849 Arabidopsis thaliana 5:7985806-7986024 (+) noncoding (-0.0053248)- 72 20.27 1
CNT30377848 Arabidopsis thaliana 5:2960108-2961257 (+) coding (0.11)2e-29 (sp|Q9LXB8|PLPK1_ARATH) 36 3.13 2
CNT30377847 Arabidopsis thaliana 5:25751543-25752487 (+) noncoding (-0.0684032)8e-99 (sp|Q9FME8|OPT4_ARATH) 45 28.1 3
CNT30377846 Arabidopsis thaliana 5:1745345-1745619 (+) noncoding (-0.0004096)- 30 20.88 1
CNT30377845 Arabidopsis thaliana 5:15260982-15265620 (-) noncoding (-0.036864)5e-36 (sp|Q9FIU5|CRLK1_ARATH) 91 2.09 3Conserved counterparts:
CNT30377844 Arabidopsis thaliana 5:23096635-23097638 (-) coding (0.243)- 37 0.55 3
CNT30377843 Arabidopsis thaliana 5:10127034-10127504 (-) noncoding (-0.0004096)- - 0 2
CNT30377842 Arabidopsis thaliana 5:8883282-8883561 (+) noncoding (-0.0004096)5e-43 (sp|Q93YV6|2A5K_ARATH) - 0 2
CNT30377841 Arabidopsis thaliana 5:6663640-6664396 (-) noncoding (-0.0196608)- 46 3.13 2
CNT30377840 Arabidopsis thaliana 5:15379642-15380240 (-) noncoding (-0.118784)- 57 0.3 1
CNT30377839 Arabidopsis thaliana 5:9608583-9609488 (-) noncoding (-0.045056)2e-32 (sp|O04647|PP399_ARATH) 45 4.67 2
CNT30377838 Arabidopsis thaliana 5:2478452-2479395 (-) noncoding (-0.0425984)5e-43 (sp|Q9FF15|FH16_ARATH) 73 0.15 2
CNT30377837 Arabidopsis thaliana 5:6683191-6683680 (+) noncoding (-0.069632)- 57 84.58 2
CNT30377836 Arabidopsis thaliana 5:1319979-1320566 (-) noncoding (-0.098304)1e-102 (sp|Q9LZ66|SIR_ARATH) 97 32.31 2Conserved counterparts:
CNT30377834 Arabidopsis thaliana 5:26906675-26906943 (+) noncoding (-0.032768)- 57 0 1
CNT30377833 Arabidopsis thaliana 5:16141472-16141678 (+) noncoding (-0.0004096)- - 96.36 1
CNT30377832 Arabidopsis thaliana 5:620059-621071 (-) coding (0.118)2e-130 (sp|Q8GXF8|SHGR9_ARATH) 43 1.53 2
CNT30377831 Arabidopsis thaliana 5:648062-648538 (+) noncoding (-0.012288)2e-62 (sp|Q8GYL7|PP361_ARATH) 58 1.97 1
CNT30377830 Arabidopsis thaliana 5:918116-918395 (-) noncoding (-0.0004096)- 39 0 2
CNT30377828 Arabidopsis thaliana 5:5936800-5937177 (-) noncoding (-0.0077824)- 62 3.37 2