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Detailed information on CNT3097927


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONSTUT001005, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30615929Solanum tuberosumSesamum indicum86.4634.3583.291149forward
CNT30511508Solanum tuberosumSolanum lycopersicum82.6283.9494.541098forward
CNT30145547Solanum tuberosumMedicago truncatula97.6765.2382.511298forward
CNT30624002Solanum tuberosumDaucus carota97.4470.7783.011295forward
CNT30120444Solanum tuberosumCitrus clementina99.1782.6380.121318forward
CNT30330510Solanum tuberosumDioscorea rotundata63.3689.6782.42842forward
CNT30595410Solanum tuberosumEragrostis curvula84.1281.9682.021118forward

Expression of CNT3097927

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRRTRWRVDSFWIL*

>peptide 2 (50 aa)
MEGRLFLDIVISKCSAIFKLFPSKDQPLLIWRNAFLVLNLSFDIINGVRTL

>peptide 3 (90 aa)
SEVSTTEPEDKMKSRLFLDIVVCKGAAILQLFASKDEPLLIWWNPFLVLYLCFHIVNSVRALHLQCDCLPSQSLHKDLHPSSQTQHQMES*

>peptide 4 (37 aa)
MVSELSTSNVIVFPVKVLTKICMPPLRRRTRCRVDSF*

Sequence

>CNT3097927
TTCAGAAGTTTCCACCACGGAGCCTGAGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGGCCATCCTCCAGCTGTTTGCC
AGCAAAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTGTCAGAGCTCTCCACCTCCAATGTG
ATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTGCATCCCTCCTCTCAAACGCAACACCAAATGGAGAGTTGACTCCTTCTGGATGTTATAGTCTGCTA
GAGTCCTCCCGTCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGGAATACCCTCCTTGTCTTGAATCTTTGCTTTGACGTTGTCAAT
GGTATCTGAACTCTCAACCTCCAATGTAATTGTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCATGCCACCTCTAAGGCGAAGAACAAGGTGCAGGGTT
GATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGT
CTTGGATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCATGCCACC
CCTCAGACGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTC
TGCTGGTCTGGAGGAATCCCTTCCTTATCCTGAATTTTGGCCTTCACGTTGTCAATTGTATCTGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAA
GTGTCTTGACAAAGATCTGCATACCACCACGAAGGCGAAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTC
AAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCG
ACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCATTCCACCACGTAGACGGAGGACAAGATGGAGGGTAGACTCTTTTTGGATAT
TGTAATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTT
GACATTATCAATGGTGTCAGAACTCTCGA