Detailed information on CNT30265094


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LZ66|SIR_ARATH, E-value = 2e-39

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377836Brassica rapaArabidopsis thaliana68.4740.9586.98215forward
CNT30613060Brassica rapaArabis alpina29.949.8988.394reverse complement

Expression of CNT30265094

Peptides detected in this lncRNA

>peptide 1 (83 aa)
PHSVINPRLRRKQSRNIIRRLLRKEIIFLHIRRRRSKNVSIQITTSPQSASHVSNNRAHHGLEILLENTVELKRLPSGQTKRP*

Sequence

>CNT30265094
CCCACATAGCGTAATAAACCCCCGACTGAGGAGAAAGCAGAGCCGCAATATTATCCGCCGTCTCTTGCGCAAAGAGATAATCTTTCTTCACATAAGGCGC
CGCCGGAGCAAGAACGTTTCTATTCAAATCACCACAAGCCCCCAAAGTGCTTCCCATGTTTCTAATAATCGAGCTCATCACGGTCTTGAGATTCTGCTTG
AGAACACCGTGGAGCTGAAACGTCTGCCTAGTGGTCAAACGAAGCGTCCCTAACCAGCTCTATTTAACTATGGACGACTTAGCAGATGAGTTCGGCATCG
GTACGCTTCGTTTG