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Detailed information on CNT30418468


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-151

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316435Papaver somniferumCorylus avellana61.719784.66743forward
CNT30279009Papaver somniferumChenopodium quinoa99.5878.4781.91199forward
CNT30123665Papaver somniferumPhyscomitrium patens91.6977.6980.161104forward
CNT30154607Papaver somniferumPrunus persica77.6673.1681.6935forward
CNT3024141Papaver somniferumPopulus trichocarpa61.5475.6183.81741forward
CNT30120587Papaver somniferumCitrus clementina94.8585.7479.861142forward
CNT30334105Papaver somniferumCynara cardunculus99.4250.7681.121197forward

Expression of CNT30418468

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVRVFTKICIPPLSRRTK*

>peptide 2 (29 aa)
SELSTSKAMVFPFKVCTKICIPPRRRKTR*

>peptide 3 (48 aa)
MESRFLLDVVVSKGTPIFQLFSSKDQSLLVWRNTFLILNLSLNVVNGI*

>peptide 4 (48 aa)
MESGFFLDVVVSKSSSIFQLLTGKDQPLLVWGNSFLILNLSLHIVNGI*

>peptide 5 (82 aa)
VGALHLQGDGFSIQGLHKDLHTTTKTQDKVKGGFLLDVVVGKGTPIFQLFPSKNQPLLIWRNTFFVLYLRLHIVYSIRTLNL*

>peptide 6 (30 aa)
MVFPVRVFTKICIPPLRRRTRWRVDSFWML*

>peptide 7 (74 aa)
RSSPPPRRWFFHSRSAQRSAYHHEDARQGEGWIPSGCCSRQGYAHLPIVSQQKSTSADLEEYLLCLVSSPSHCL*

>peptide 8 (73 aa)
MESGFLLDVVVSKGAPIFQLLPSKNQPLLVWRNTFLVLDLGLDIIDSIRALDLQSNGLSSQGFHKDLHTTSET*

Sequence

>CNT30418468
GTCGGAGCTCTCCACCTCCAAGGCGATGGTTTTTCCATTCAAGGTCTGCACAAAGATCTGCATACCACCACGAAGACGCAAGACAAGGTGAAGGGTGGAT
TCCTTCTGGATGTTGTAGTCGGCAAGGGTACGCCCATCTTCCAATTGTTTCCCAGCAAAAATCAACCTCTGCTGATCTGGAGGAATACCTTCTTTGTCTT
GTATCTTCGCCTTCACATTGTCTATAGTATCCGAACTCTCAACCTCTAAAGTGATTGTTTTTCCAGTCAGGGTTTTCACAAAAATCTGCATACCACCTCT
GAGACGAAGCACCAAATGGAGAGTAGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGCCCATCTTCCAATTGTTTTCCAGCAAAGATCAGTCGTTGC
TGGTCTGGAGGAATACCTTCCTTATCTTGAATCTTAGCCTTAACGTTGTCAATGGTATCTGAACTCTCAACTTCTAAGGTGATGGTCTTTCCAGTAAGGG
TTTTCACAAAGATCTGCATACCACCTCTTAGTCGTAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGCCCATCTTCCAA
TTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTATCTTGGATCTTGGCCTTGACATTATCGATAGTATCAGAACTTTCGACT
TCCAAAGTGATAGTCTTTCCAGTTAGGGTTTTTACAAAGATTTGCATACCACCTCTGAGACGGAGGACAAGATGGAGAGTGGATTCCTTCTGGATGTTGT
AGTCAGCAAGGGTGCGCCCATCTTCCAATTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGAC
ATTATCGATAGTATCAGAGCTCTCGACCTCCAAAGTAATGGTCTTTCCAGTCAGGGTTTTCACAAAGATTTGCATACCACCTCTGAGACGTAGGACAAGA
TGGAGAGTGGATTCTTTCTGGATGTTGTAGTCAGCAAGAGTTCTTCCATCTTCCAACTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGGGGAATTC
CTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATGGTATCTGAGCTCTCAACCTCAAGTGTAATGGTCTTGCCAGTGAGAGTTTTCACAAAAATCTG
CATC