Detailed information on CNT308251


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519692Zea maysSetaria italica60.7340.4386.93283forward
CNT30459122Zea maysSaccharum spontaneum69.5359.5693.83324forward
CNT30352780Zea maysEragrostis tef24.2521.1285.84113forward
CNT30364968Zea maysSorghum bicolor69.5355.0191.36324forward
CNT30583932Zea maysEchinochloa crusgalli40.9926.3491.62191forward
CNT30592774Zea maysEragrostis curvula27.2538.2583.46127forward

Expression of CNT308251

Peptides detected in this lncRNA

>peptide 1 (32 aa)
PECNRLLATTPSSARLLCALKPGLPVLSGPLT*

Sequence

>CNT308251
CCTGAGTGTAACAGATTGCTGGCCACGACCCCGAGCAGTGCCAGGTTGTTGTGCGCGTTGAAACCTGGTTTGCCTGTTTTGTCTGGCCCTCTCACTTAAG
TTGATTGTTCTGGAACGAGTTTCAGCAGCCTCCACTACAGTACTGGTGTTCCGCTGTTCAGAAGACGCACCAGCTTGGGCTGGGTTAGAGGAAGGTTCAC
GAGCAGGAGATGCATCTGCAGTTCTGCTTGGTGAGGCATCAGCTGCACCAGGTTGTGTTATAGGACTTTGGTCCGGTTCCACAGCAGCACGTTCGGCTGT
AGCCTCACCCTCGATCTCTGACATATCAACGTCACTCTTGTCTTCAGGTTCCTCTGCCAACTCTCCCTCCTCCATGTCATCATCAACATCAGTTGCAGTA
GTACGCTGAGCATCTTCCTTCGAATCTTCTGTTTTCCGGTCATCATCAAATGATTCAATTATTGCC