Detailed information on CNT30352780


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519692Eragrostis tefSetaria italica21.3116.2989.47114forward
CNT30459122Eragrostis tefSaccharum spontaneum24.323.985.38130forward
CNT308251Eragrostis tefZea mays21.1224.2585.84113forward
CNT30364968Eragrostis tefSorghum bicolor21.1219.1987.61113forward
CNT30583932Eragrostis tefEchinochloa crusgalli21.3115.7288.6114forward
CNT30592774Eragrostis tefEragrostis curvula60.7597.8993.23325forward

Expression of CNT30352780

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MHLWFGLVRHQLLLLVLLGFGLVPLQDVQQWWHQLRQYLTYQDHSFLLALPEMPH*

Sequence

>CNT30352780
CCCCTGGTAGGCTGTTGTGAGCGCTGCATCCTAGCTTGCCTGTTTAGTATGGCTCTCTGAGTTACATTGATAATTGTAGAACGACTTTCATCCCCATCAG
CTACAGTACTCTGCTGTTCGGATGATCCACCGGCTTGGGCTTGGTTAGGGGAAGGTTCACGTGCAGGGGATGCATCTGTGGTTCGGCTTGGTGAGGCATC
AGCTCCTCCTGCTGGTGCTATTGGGCTTTGGTCTGGTTCCGCTGCAGGACGTTCAGCAGTGGTGGCATCAGCTTCGCCAGTATCTGACATATCAAGATCA
CTCTTTTCTGTTGGCCCTCCCGGAGATGCCGCACTGAAAGAATTACCAGCTTGCTCGCCAATATCCGAAGGTTCCCTTTGAGCTTCTTCCAGAGCAGTAG
TTCCTAGAGGTTCAGGTTCCTCTGGCAACTCTCCCTCCTCCATCTCATCGTCAGCATCTGTCGTTGTAGTAAGCTGAGCCTCTTCCTTCAAATCGTCGAT
TTTCTGGTCCTCATCAAATGATTGCACAGCTGCCT