Detailed information on CNT30592774


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519692Eragrostis curvulaSetaria italica39.1618.5781.54130forward
CNT30459122Eragrostis curvulaSaccharum spontaneum39.1623.983.85130forward
CNT308251Eragrostis curvulaZea mays38.2527.2583.46127forward
CNT30352780Eragrostis curvulaEragrostis tef97.8960.7593.23325forward
CNT30364968Eragrostis curvulaSorghum bicolor37.6521.2283.2125forward
CNT30583932Eragrostis curvulaEchinochloa crusgalli39.1617.9386.15130forward

Expression of CNT30592774

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MHLWFGLVRHQPLLMVLLGFGLVPLQHVQQSYQLPQYRTYQDHSFLLALPE

Sequence

>CNT30592774
TTGTCCACGACCCCTGGAAGGCTGTTGTAAGCGCTGCATCCTAGCTTGCCTGTTTAGTGTGGCTCTCTGATTTACATTGATAATTCTAGGACGACTTTCA
TCCCCATCAGCTACAGTACTATGCTGTTCGGATGATCCACCAGCTTGGGCTCGGTTAGGGGAAGGTTCACGTGCAGGGGATGCATCTCTGGTTCGGATTG
GTGAGGCATCAGCCCCTCCTGATGGTGCTATTGGGCTTTGGTCTGGTTCCCCTGCAGCACGTTCAGCAGAGCTATCAGCTTCCCCAGTATCGGACATATC
AAGATCACTCTTTTCTGTTGGCCCTCCCGGAG