CANTATAdb - search

Detailed information on CNT30709679

BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 1e-79

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30315988	Glycine max	Corylus avellana	38.22	77.62	89.88	326	forward
CNT30548555	Glycine max	Ipomoea triloba	30.6	51.48	88.51	261	forward
CNT30514020	Glycine max	Juglans regia	27.43	26.44	90.17	234	forward
CNT30525058	Glycine max	Phaseolus vulgaris	40.56	67.05	90.75	346	forward
CNT30539881	Glycine max	Brassica napus	27.78	30.98	87.34	237	forward
CNT3078263	Glycine max	Brassica juncea	27.78	30.46	88.19	237	forward
CNT3055166	Glycine max	Amborella trichopoda	31.3	32.96	87.27	267	forward

Expression of CNT30709679

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MARMLWAWIRLGFLGLRKAQQCPSRSRLGTHRLGRTGARQRMGPST*

>peptide 2 (37 aa)
MGPASRPCQPRMGMREPWKKLLPFFNSRMSFALCFVL*

>peptide 3 (34 aa)
MLTLPTSGADGPSFTALPAKDGDERAMEEAAAIF*

>peptide 4 (32 aa)
MANRPFLSSFTLSSAKASGSSARPNGSKLPPG*

Sequence

>CNT30709679
GGCGTCAAAAGCTTAGAAGTATAAAATGAGAGAACAAATTGACACTTGAGTTTTGTAAAAAGCAAGTAACATTAAGTTGGATTCGGATACACAAGATAAT
TCACATTATCTGAAGTACTTCACCAAACACAAATCTAAAAACTCTCAAAAGTCATTTCGTTCTTTGACGCTCACTTTCCGGGGACGAAGTTGGTGGCATA
GGCCCAGGCGTTGTTGTTGACAGGGTCAGCAAGGTGATCGGCGAGGTTCTCCAATGGACCCTTTCCGGTGACAATGGCCTGAACAAAGAAGCCAAACATA
GAGAACATGGCCAATCGTCCGTTCTTGAGTTCCTTCACCTTAAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCGAAGCTGCCACCTG
GGTAGATTGGGTCAGTGACCTCACCGAGGGGGCCACCAGCAATACGGTAACCTTCAACGGCACCCATTAGGATAACTTGTGTGGCCCAGATGGCGAGGAT
GCTCTGGGCGTGGATCAGGCTTGGGTTTCTGGGTCTGCGGAAAGCCCAGCAGTGTCCCAGCCGTAGTCGCCTGGGAACTCACCGGTTAGGTAGGACGGGG
GCTCGCCAGAGAATGGGCCCAAGTACTTGACTCGGTCTGGGCCGTACCATGGGCTTCCTGAGGAGACCTGCTTGGTGACGGTCTTCCTCATGCTCACCCT
TCCCACTTCTGGGGCTGATGGGCCCAGCTTCACGGCCTTGCCAGCCAAGGATGGGGATGAGAGAGCCATGGAAGAAGCTGCTGCCATTTTTTAACTCAAG
GATGAGCTTTGCTTTGTGCTTTGTGTTATGAGTGTTTTGAAGTGGTGAGTGAC