Detailed information on CNT30315988


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 4e-75

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-51

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548768Corylus avellanaIpomoea triloba58.5766.3186.99246forward
CNT30380492Corylus avellanaManihot esculenta63.136.287.92265forward
CNT30709679Corylus avellanaGlycine max77.6238.2289.88326forward
CNT30173253Corylus avellanaTrifolium pratense67.3833.2584.45283forward
CNT3078263Corylus avellanaBrassica juncea56.6730.5986.55238forward
CNT30417231Corylus avellanaPapaver somniferum62.1435.0883.52261forward
CNT30572261Corylus avellanaVitis vinifera52.3826.8988.64220forward

Expression of CNT30315988

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGQSFHPGKLGQSPHRVAHQQYGNPQRHPSR*

>peptide 2 (35 aa)
MENIANLPFLSSFTLSSAKASGSSARPNGSKLPPG*

>peptide 3 (62 aa)
QRFRGEVLQVIHILCNFEEKSFTGSQYLRLTFRGRSLWRKPRHCCLLGRQGGRPSSPTVLFR*

Sequence

>CNT30315988
TCAGAGATTCAGAGGAGAAGTACTACAGGTAATTCACATTTTGTGCAATTTTGAGGAGAAAAGCTTCACGGGGTCTCAATATCTCCGGCTCACTTTCCGG
GGACGAAGTTTGTGGCGTAAGCCCAGGCATTGTTGTTTACTGGGTCGGCAAGGTGGTCGGCCAAGTTCTCCAACGGTCCTTTTCCGGTGACAATGGCCTG
AACAAAGAAGCCAAACATGGAGAACATAGCCAATCTTCCATTCTTGAGCTCCTTCACCTTAAGCTCAGCAAAAGCCTCCGGGTCATCAGCAAGGCCCAAT
GGGTCAAAGCTTCCACCCGGGTAAATTGGGTCAGTCACCTCACCGAGTGGCCCACCAGCAATACGGTAACCCTCAACGGCACCCATCAAGATGACCTGAG
TTGCCCAGATGGCCAGAATG