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Detailed information on CNT30525058


BLAST search results

BLAST vs Swiss-Prot:
sp|P08221|CB21_CUCSA, E-value = 4e-117

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548555Phaseolus vulgarisIpomoea triloba5050.8989.15258forward
CNT30514020Phaseolus vulgarisJuglans regia44.7726.189.61231forward
CNT30629101Phaseolus vulgarisVigna unguiculata64.1548.6898.19331forward
CNT30504488Phaseolus vulgarisNicotiana attenuata66.4771.1683.09343forward
CNT30709679Phaseolus vulgarisGlycine max67.0540.5690.75346forward
CNT30544802Phaseolus vulgarisBrassica napus45.7434.686.44236forward
CNT30310534Phaseolus vulgarisCamelina sativa45.9320.0286.92237forward
CNT3078263Phaseolus vulgarisBrassica juncea46.1230.5986.55238forward
CNT30129910Phaseolus vulgarisCorymbia citriodora97.8780.1684.55505forward
CNT3055166Phaseolus vulgarisAmborella trichopoda58.5337.2885.76302forward
CNT30176337Phaseolus vulgarisVigna angularis50.9725.9496.2263forward

Expression of CNT30525058

Peptides detected in this lncRNA

>peptide 1 (55 aa)
LMVLTFRGRSWWRRPRRCCSLGRQGDRRGSPRDPFRSQWPGRRTRTWRTWPTYRS*

>peptide 2 (43 aa)
MAWTKNPNMENMANLPFLSSFTLSSAKASGSSARPNGSKLPPG*

Sequence

>CNT30525058
TTCTGATGGTGCTCACTTTCCGGGGACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTCACTGGGTCGGCAAGGTGATCGGCGAGGTTCTCCAAGGGA
CCCTTTCCGGTCACAATGGCCTGGACGAAGAACCCGAACATGGAGAACATGGCCAACCTACCGTTCTTGAGTTCCTTCACCTTGAGCTCAGCGAAAGCCT
CTGGGTCGTCAGCGAGGCCCAATGGGTCGAAGCTGCCACCGGGGTAAATGGGGTCAGTGATCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTCGAC
GGCGCCCATGAGGATGACTTGGGTGGCCCAGATGGCGAGGATGCTCTGAGCGTGGACGAGCCCACCCTCGCTGAAGATCTGGGAACCAGCTTTGAACCAG
ACGGCCTCGCCGAATTTCACGCCGTTGCGGGACAGGAGTTCGGGGAAGACGCAGCCCAAGGCTCCGAGCATGGCCCACCTGGAGTGGATGACTTCCAGCT
CACGGTTCTTGGCGAA