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Detailed information on CNT30514020


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 5e-108

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548768Juglans regiaIpomoea triloba26.2162.5387.07232forward
CNT30702989Juglans regiaQuercus lobata26.3324.485.41233forward
CNT30269327Juglans regiaChenopodium quinoa37.8538.2983.58335forward
CNT30525058Juglans regiaPhaseolus vulgaris26.144.7789.61231forward
CNT30628831Juglans regiaVigna unguiculata26.3332.9188.84233forward
CNT30504491Juglans regiaNicotiana attenuata34.832.4987.99308forward
CNT30709679Juglans regiaGlycine max26.4427.4390.17234forward
CNT3046618Juglans regiaPrunus dulcis36.6138.7687.04324forward
CNT30633669Juglans regiaCapsicum annuum36.8441.7485.58326forward
CNT30171059Juglans regiaTrifolium pratense26.4439.884.62234forward
CNT30146402Juglans regiaMedicago truncatula64.0756.1981.48567forward
CNT30313626Juglans regiaCamelina sativa23.6218.1386.6209forward
CNT3078263Juglans regiaBrassica juncea26.4430.0884.62234forward
CNT30598305Juglans regiaFraxinus excelsior25.5433.0986.28226forward
CNT30202642Juglans regiaHelianthus annuus30.7348.8385.66272forward
CNT30623366Juglans regiaDaucus carota38.0832.3785.46337forward
CNT30354802Juglans regiaLactuca sativa58.8760.5184.07521forward
CNT30705055Juglans regiaPrunus avium34.848.7387.66308forward
CNT30119285Juglans regiaCitrus clementina29.7229.4287.83263forward
CNT30176337Juglans regiaVigna angularis25.9922.6887.83230forward
CNT30337332Juglans regiaCynara cardunculus38.4225.7486.47340forward

Expression of CNT30514020

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSLFLAKVSGSADNPAVSQP*

>peptide 2 (42 aa)
GVHHISSTSNISHLVLFFIPIYISDLKFTLKLEENNFMGSQH*

>peptide 3 (46 aa)
MEVAFLMVTRPTPSSGVDGASLTALPANDGEERAIAEAAIDVNCKE*

>peptide 4 (57 aa)
MACTKNPNMENMANLPFLSSFTLSSAKASGSSARPKGSKLPPGVPQQYGNPQQHPSR*

>peptide 5 (68 aa)
MDQAWVAQVVKATLAEDLGSSLKPHGLSELDSITGQELGEDASKCSKHGPPRMDDFKFPVLGKGFWVS*

Sequence

>CNT30514020
GGCGTTCATCATATTAGTAGTACAAGTAATATTTCACATTTAGTGCTCTTTTTCATACCAATTTACATCAGTGATCTCAAATTCACACTCAAATTGGAGG
AAAATAATTTCATGGGGTCACAACATTAATTTGTTGCTCACTTTCCGGGGACGAAGTTGGTTGCATAGGCCCAGGCATTGTTGTTCACTGGGTCGGCAAG
GTGGTCGGCGAGGTTTTCCAAGGGTCCCTTTCCGGTAACAATGGCTTGCACAAAGAATCCGAACATGGAGAACATGGCCAATCTTCCATTCTTGAGCTCC
TTCACCTTAAGCTCAGCAAAAGCCTCTGGATCATCAGCAAGGCCCAAGGGATCAAAGCTTCCACCTGGGGTCCCCCAGCAATACGGTAACCCTCAACAGC
ACCCATCAAGATGACTTGTGTGGCCCAGATGGCCAAAATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGGCCACCCTCGCTGAAGATT
TGGGCTCCAGCCTTAAACCACACGGCCTCTCCGAACTTGACTCCATTACGGGCCAAGAGCTCGGGGAAGACGCATCCAAGTGCTCCAAGCATGGCCCACC
TAGAATGGATGACTTCAAGTTCCCTGTTCTTGGCAAAGGTTTCTGGGTCAGCTGATAACCCAGCAGTGTCCCAACCATAATCGCCGGGAAATTCTCCAGT
AAGGTAAGATGGAGGTAGCTTTCCTCATGGTGACCCGTCCAACACCGAGCTCGGGGGTGGATGGAGCAAGCTTGACCGCCTTGCCGGCAAATGATGGAGA
AGAGAGAGCCATTGCTGAAGCAGCCATTGATGTAAATTGTAAAGAATAGTGTAAGAAACAATAATGGGAGAGAGGTAGTGATGGG