Detailed information on CNT30705167


BLAST search results

BLAST vs Swiss-Prot:
sp|P10538|AMYB_SOYBN, E-value = 4e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30271054Prunus aviumChenopodium quinoa26.812.6986.5289forward
CNT30632174Prunus aviumVigna unguiculata53.6124.5583.15178forward
CNT30200734Prunus aviumPisum sativum37.6558.6986.4125forward
CNT30709279Prunus aviumGlycine max34.0422.5186.73113forward
CNT30719070Prunus aviumMalus domestica golden22.8911.7588.1676forward
CNT30625828Prunus aviumDaucus carota31.339.5486.54104forward
CNT30175717Prunus aviumVigna angularis53.6129.7783.71178forward
CNT30337038Prunus aviumCynara cardunculus26.8113.9787.6489forward

Expression of CNT30705167

Peptides detected in this lncRNA

>peptide 1 (33 aa)
SVPISIFQVVVSCSKLRGMIISFIPPVDSRYLF*

Sequence

>CNT30705167
GGTCGGTACCCATCTCTATCTTTCAAGTTGTAGTATCCTGCAGTAAGCTCCGCGGCATGATTATCAGCTTTATACCACCAGTGGATTCCAGATACCTGTT
TTGATAATCAATCATGTACTCTTGGATTAACATCGGGTGAAAGATGCTTTGTTGGCTTCATCCAGGATCTGATCGCCATGGCTCAGTAATTTGTTAGAGT
ACCAAGTCAAGAAGAACTTCCCTTTCTCAGTAAGGTATGTCCCGTTTGATTTGAAGAACTCTGTAGATTCAGGAGTGTCATTGTATTCTCCTGCATTATC
TGGCAACTCCCATTCAGGATGACCTGCAGCTG