Detailed information on CNT30271054


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT005866, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30362245Chenopodium quinoaSorghum bicolor2.5431.784.5284forward
CNT30705167Chenopodium quinoaPrunus avium2.6926.8186.5289forward
CNT30175700Chenopodium quinoaVigna angularis3.620.1482.35119forward

Expression of CNT30271054

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MMIINKMILVFGCDFFLHFGLLILNDGHP*

>peptide 2 (29 aa)
MLYLLLPGSDHHGSITCLNTKSRRIFHFQ*

>peptide 3 (32 aa)
MLRVTFSTTIEATATGYQSYHHVLLPYVHTHV*

>peptide 4 (34 aa)
MQNHCWIVECHCLFIYDSSSLTAPPPPPSPRNSV*

>peptide 5 (30 aa)
MFANCLVFNSIIEASQTFICFTSSCGALLA*

>peptide 6 (31 aa)
MTIFTYLCCYFDFAATKCCICFFQDLITMDQ*

>peptide 7 (42 aa)
MASLSCCFFKILFQIFVIALQNRKSKLSYFLNTRYFYQFNHT*

>peptide 8 (44 aa)
MTPSTSASFSLYSCLLMSSWFSKLLSSVTTPNCFHQTNKELVIL*

>peptide 9 (36 aa)
MDTREVGECLGASTSRRKICLTGNIKLTNITFAFLH*

>peptide 10 (39 aa)
MWVSLRSSISMKTLRIIACFSISVFSLMLKGLVTQLRIV*

>peptide 11 (50 aa)
MQKNVGFSPIFHIYEDIKDNSLLFNFCIFSHVKRACNTVAHCIGRCLDGI*

>peptide 12 (49 aa)
MYCFHMFILMYNTEYMFQMYCGYCYYFQSRPFIFKNQSCTSIQVTLKVI*

>peptide 13 (44 aa)
MCVIVYVKDKLLNLGKPRQLKLHLIHSCITYLVKLQALIGIFGE*

>peptide 14 (29 aa)
MMATPKFCDYQLLFMKSKSTVELEWTLGK*

Sequence

>CNT30271054
ACAGCATCAACGGAGGAAACATCAACAACAATTAATAACAATTAACAACAAACAACGAGACACCCAGTGAGGATCCCCACAGATAGGTTCTGTGGCTTCC
TTATTAGCCTACCTGGGTCTTATTAGCCTATCTTAACAGAAACATTATTTTCTTGCTTGACAATTGCATGTTTGCCAATTGCCTTGTGTTTAACTCTATT
ATAGAAGCTTCTCAAACTTTCATATGTTTCACAAGCTCTTGTGGAGCACTTTTAGCATAACCAGGCTGTTCATAGTCCTTCATCTCCAAACATGTAAAGT
CTAAAACCCCATAGTGACGAGAAAGCATCCTTGCTATTGGACGATACCCGTCTCGGTCTTTCAAGTTGTAATATCCTGCAGTAACCTCAGCAGCATGACT
GTCATCGTTGTACCACCAATGTATTCCAGAAACCTGGTTGTCAATTGAAAACAAATAAAATTAGTCACCTTGTGGATAATACTTTCTCTAGCAGTTGATG
CTCCTATGACTATATTTACTTACCTTTGCTGCTACTTTGACTTTGCAGCCACAAAATGCTGTATTTGCTTCTTCCAGGATCTGATCACCATGGATCAATA
ACTTGTTTGAATACCAAGTCAAGAAGAATTTTCCACTTTCAGTAAGGTATGTCCCATTGTTTCTGAAAAATTCTGTGGCTTCTGGTCTGTCATTATATTG
CCCTGCATTTGCTGGTAATTCCCACTCAGGATGGCCAGCCTCAGTTGCTGCTTTTTTAAAATCCTCTTTCAAATATTTGTCATAGCACTGCAAAATAGAA
AATCGAAACTCAGCTATTTTCTAAATACAAGGTATTTTTATCAGTTTAATCACACATAAGTAGGCATATCGGATTAGCTGGCAGAGCCAATTTCGTTTAA
ACCTGAAATTCCCCTATTCCTGGGTAGCTCCATCCTTGATTTTGTGGATAAGAAGGATAACGTAGTTCACCAGCTGGGCCAAGGCCTACTTCAATGTCAA
CTATCACACCAGCATCTAGAAAATCTGACATACTCTGTCTGAAGCTCTTCATGTAATCACTATAGATCTGTGAAGTTATAACAAGAAATTAGTGCCATTT
CTCTCTCCTTTTTCAGGCATGTGCGTTATTGTTTATGTGAAGGACAAACTATTGAATTTAGGGAAACCTAGGCAATTAAAACTCCATCTAATACATTCGT
GTATAACTTATTTGGTAAAACTGCAGGCTTTAATTGGGATATTTGGAGAATAGTTACCTGAACGGGAGTTCGTCCTCCAATGATAGCTTCATTATCAACA
CCAATAGTCAGATACTCTTTGTTTCTGGTACCCCTTTTATTAGTATAGAAAATATCAGGGTTAGTATCTCCAACTTGAAGTACCCATTGAGGAAGTGGAA
CATTCACAGCATCTCCTACATTCCCTCCACATTGATGAAATGACATTATGGCTTGTACTTTCAGGCCACAATCCTTTATGACCTGAAATAAGCTTCTGTA
AGCATTCCAATTGTATTGCTTAGGTCCTTTAGCTTCTATTATTCCCCACCAGACGTCAACCATGACTCCATCAACTTCTGCTTCCTTCAGTTTGTATAGC
TGTCTCTTGATGTCATCCTGGTTCTCAAAGTTGTTGTCATCTGTAACCACTCCCAACTGTTTCCATCAAACAAATAAAGAACTTGTCATTCTGTGACTTT
GTTATTCGAGTAAATTAAGCTGATGCTTGTGTTAATCAGGGCTTACCGGTAGCATTGCATAGACGGGCACATAGTTCAGAAGAATCTTTGCCATATCTCT
GACTCTAGCTGGGACCTGCATTATCTTATTGAACTGTCATTGGGAATCAAGAGGAAGATTGGCAATTTTAATGGGAATAGGCAAATAGAAGATTCTTTGA
GTGCACTGATATGGGACTGATCATAATAGATGTACATTTAATTAATCTCAAATAGCTAAACAACCAACCACATGTTTCTCTAGCTGAGATCCACATTGTT
AGTTGCAATATGATGCATTCTCATAACTACACATAGAGTTCTTGACATTATTGACAACTTATCATGGAGGCCCAATTTTAGAACTTTTTCTACGGTCACT
TACAAACTTGAACTATTCTAAATAGGTGGATTTCAAGTTCAAATTTTCAATCCTATTTTTTAAAAAAAGAGTTTCGCGTTTTCAATCGTCAATGATGATT
ATAAACAAAATGATCCTTGTGTTTGGCTGTGATTTTTTCTTGCACTTCGGCCTTTTGATTCTAAATGATGGCCACCCCTAAGTTCTGTGATTATCAACTG
CTTTTTATGAAATCAAAATCAACTGTGGAGCTTGAATGGACACTAGGGAAGTAGGGGAATGCCTTGGTGCATCAACTTCACGGAGAAAGATTTGCTTAAC
AGGTAATATAAAGCTGACCAACATTACGTTTGCATTCCTTCATTAAGCTTAAAGAACTTGGGTTTTTCTCTTATATTGTGAATGCAGAATCACTGCTGGA
TTGTAGAATGCCATTGTCTATTTATTTATGATTCTTCTTCTCTCACCGCCCCCCCCCCCCCCCCATCCCCTCGAAACAGTGTCTGATATTGGTTTCAGGA
TCTAACGTCAGTTTCAGTCCTGCCGCAAACTGATTTCAGTTGCAAACAGATTCGTTTTGCGTCAGTGGTAGGCTTGCCTCCTCATTTTCAGCTTTTCAAG
CTTCAGAAACAGTTACTGCTGCTTCACCTTGCTGTAATTTGCGCACCTAGTTAATGCTGAACTAATTTTTAAAAATGTTACGTGTAACATTTTCTACTAC
AATAGAAGCCACAGCCACAGGTTACCAATCTTACCATCATGTACTGCTTCCATATGTTCATACTCATGTATAATACGGAGTATATGTTTCAAATGTATTG
TGGCTATTGTTATTATTTTCAATCTCGGCCGTTCATTTTTAAAAACCAATCTTGTACATCCATCCAAGTGACTTTAAAAGTTATTTAAATATTATAAAAT
AAATAAAAAAAAAAAACTGTTTTCTAGTTATTTTAAAATAAAATAAAATAAAGGAAAGTAATGCAAAAGAATGTGGGTTTCTCTCCGATCTTCCATATCT
ATGAAGACATTAAGGATAATAGCTTGCTTTTCAATTTCTGTATTTTCTCTCATGTTAAAAGGGCTTGTAACACAGTTGCGCATTGTATAGGTAGATGCCT
AGATGGGATATGAATAATTATGATGAGTATGTTTGTATTGGGTCTATTCCCCAAAGAGATTTCTGTATTTGGTGATTGGCCATGGGAGTTTTGATGATTG
GTAATTTCAT