Detailed information on CNT30175717


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632174Vigna angularisVigna unguiculata55.0245.3896.35329forward
CNT30200734Vigna angularisPisum sativum30.4385.4587.91182forward
CNT30709279Vigna angularisGlycine max30.135.8694.44180forward
CNT30705167Vigna angularisPrunus avium29.7753.6183.71178forward

Expression of CNT30175717

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MMARQHSCNGTISVSIIKVVISSSKLSCVIFNFVPPVDSRYLSSWSEARNALLAFSRI*

>peptide 2 (42 aa)
MASPCCSCFEICLQIFVIALHIAEFHSYDTSVVQIINKSQFR*

>peptide 3 (30 aa)
TCITSSCGALLASELCSESLISRHVKFKMA*

>peptide 4 (29 aa)
MLCWLSLGFDHHDSAICLNTKSRRTSLSQ*

Sequence

>CNT30175717
ACCTGCATTACGAGCTCCTGTGGTGCACTTTTGGCATCTGAGCTTTGTTCTGAGTCTCTCATCTCAAGACACGTAAAGTTCAAAATGGCATGATGGCGAG
ACAGCATTCTTGCAATGGGACGATATCCGTCTCTATCATTAAGGTTGTAATATCCAGCAGTAAGCTCAGCTGCGTGATTTTCAACTTTGTACCACCAGTG
GATTCCAGATACCTGTCATCATGGTCAGAGGCCAGGAATGCTTTGTTGGCTTTCTCTAGGATTTGATCACCATGACTCAGCAATTTGTTTGAATACCAAG
TCAAGAAGAACTTCCCTTTCTCAGTGACATACGTGCCATTTGATTTGAAGAATCCAGTAGATTCGGGAACATCATTGTACTGGCCTGCGTCATCTGGCAG
TTCCCATTCAGGATGGCCAGCCCTTGCTGCAGCTGCTTTGAAATCTGCCTTCAAATATTTGTCATAGCACTGCATATTGCAGAATTTCATTCTTATGATA
CTTCAGTTGTTCAAATAATCAACAAATCCCAGTTTCGATGAGAAACAACTCTGTTTTGAAAGATAAGACCAGACTCACCTGAAATTCTCCAATACCAG