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Detailed information on CNT30632174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200734Vigna unguiculataPisum sativum25.185.4586.26182forward
CNT30709279Vigna unguiculataGlycine max25.2436.4591.26183forward
CNT30705167Vigna unguiculataPrunus avium24.5553.6183.15178forward
CNT30175717Vigna unguiculataVigna angularis45.3855.0296.35329forward

Expression of CNT30632174

Peptides detected in this lncRNA

>peptide 1 (88 aa)
TRTLPRCLDIATSWHYTADFGGWVLYLYPERYLLFPADYLSTLSTIGNQPSIFISVSGSQGNGGIGLVASRRTSMGIFGPDGFNGVMT*

>peptide 2 (29 aa)
MLCWLSLGSDHHDSAICLNTKSRRTSLSQ*

Sequence

>CNT30632174
ACGCGAACACTGCCTAGATGTCTAGACATTGCTACTTCATGGCATTATACTGCTGATTTTGGTGGCTGGGTGCTTTATTTATATCCTGAACGGTATCTAT
TATTTCCAGCAGATTATTTAAGTACTCTTAGCACCATTGGAAATCAGCCATCAATTTTCATATCTGTCTCTGGAAGCCAGGGGAATGGTGGTATTGGTTT
AGTCGCTTCAAGAAGAACCTCAATGGGAATCTTTGGTCCCGATGGCTTCAATGGAGTTATGACATGATTGTAGTTTTGAGGGTCTGCACAGTAACCCTGT
AATTATAGGGGAACAGGATTAGCAATCTTCAAGTAGATCATCTGATAGGCGAAGATATGTCACTCCAAACATCATTAGTTTTGGAGGGCCATTTTTGTTG
TAATATCCAGCAGTAAGCTCAGCAGCGTGATTTTCAACTCTGTACCACCAGTGGATTCCAGATACCTGTCATCATGGTCAGAGCCCTGGAATGCTTTGTT
GGCTTTCTCTAGGATCTGATCACCATGACTCAGCAATTTGTTTGAATACCAAGTCAAGAAGAACTTCCCTTTCTCAGTGACATATGTGCCATTTAATTTG
AAAAATCCCGTAGATTCTGGAACATCATTATACTGGCCTGCGTCATCTGGCAGTTCCCATTCAGGATGGCCAGCCCTTGCTGCAGCTGCTTTGAAATCTG
CCTTCAAATACTTGTCATAGCACTG