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Detailed information on CNT30337038


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30705167Cynara cardunculusPrunus avium13.9726.8187.6489forward

Expression of CNT30337038

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MVVFTDMFVTLLYMVVRIFWRFCYILCTKTIKL*

>peptide 2 (40 aa)
QTAPNNRIIWCNVMAKTKNPNQLSLHITFIVEENLMILSS*

Sequence

>CNT30337038
CCAAACAGCACCTAATAATAGAATCATTTGGTGCAATGTAATGGCGAAAACGAAAAATCCGAATCAGTTATCACTTCACATTACTTTCATTGTTGAAGAG
AATTTGATGATACTCTCTTCCTAATATTTTGTTATCGCAGAAACAGCAATGGATTTGGGTATTTGAATGAAAACTGAAATTGTTTTGTAATGGAAGAACT
TGCCATGGCTGCCATAGCCCAGGAAGGCTTTGTTGGCTTCGTTCAAGATCTGATCACCATGGATCAATAACTTGTTGGAATACCAAGTCAAGAAGAACTT
CCCTTTTTCACTAAGCTGTTGGGCAGGTCTCACGAGGATCAAACAATCCAGAAATTGATGGTACCTTCTTTAACCTTTTTGGTCGACATTGTGTTTGTTT
TGTATTTTAGTATGTGATCGTTAATAAATCTCGGTACGACTTTGTTTTAGTTTCATCATTGAAGCGTTTTTTTTTGTCGATACGTAGTTATGGTCGTATT
TACCGACATGTTTGTGACCCTGTTGTACATGGTCGTTCGTATTTTTTGGAGGTTTTGTTACATATTGTGTACAAAGACTATAAAATTGTAGATCGATTGG
ATGAGCGATGAATTAAATAAATCGTAAAAGTTCATGC