Detailed information on CNT30719070


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30705167Malus domestica goldenPrunus avium11.7522.8988.1676forward

Expression of CNT30719070

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MTCNRCSLLKLCLEILVIALQYGIDATARGLWITLQERKAGAELVRCLHTLLAPSALSSTFESGTCGQKKHLL*

>peptide 2 (37 aa)
MVMEDFLESFGWRGKEKTVATLFSGHAYCCLLHFLWT*

>peptide 3 (33 aa)
MLIVVFSIFCGLESICSKIETKNASEQENIVFL*

>peptide 4 (30 aa)
MRAEEAPTVISSYFLSQTTESCACCHGDYT*

>peptide 5 (59 aa)
MQQLEDFGLHCRSGKLGLNWFVASILYLLPLHSRARLKVEHAGRRSTYCDKQLLSLPNH*

Sequence

>CNT30719070
GAAGAACCCTGAGGATTCAGGAGTATCATTGTATTCTCCGGCGTTAACTGGCAATGCCCATTCAGGATGACCTGCAACCGTTGCAGCCTCCTTAAACTCT
GCTTGGAGATACTTGTCATAGCACTGCAATATGGAATAGATGCAACAGCTCGAGGACTTTGGATTACACTGCAGGAGCGGAAAGCTGGGGCTGAACTGGT
TCGTTGCCTCCATACTCTACTTGCTCCCTCTGCACTCTCGAGCACGTTTGAAAGTGGAACATGCGGGCAGAAGAAGCACCTACTGTGATAAGCAGTTACT
TTCTCTCCCAAACCACTGAGAGCTGTGCTTGTTGTCATGGGGACTATACGTAACGACGATGCTACCACGCTGTAATATTATGGAGCAGAAAAGAGTCCGT
GCGACATGAAGCGTGATGTAGTATGAAAACTCTGGTTTCTTGTTGCCTGCATTGATATATAGGTTATGGTAATGGAAGATTTTCTAGAGAGTTTTGGTTG
GAGAGGAAAAGAGAAGACGGTGGCCACATTATTTTCTGGCCATGCTTATTGTTGTCTTCTCCATTTTTTGTGGACTTGAGAGCATCTGTTCAAAGATAGA
AACAAAAAATGCATCCGAACAAGAAAATATTGTATTCCTTTGAAAAG