Detailed information on CNT30689289


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690183Triticum urartuOryza sativa20.5926.4294.0584forward
CNT30522415Triticum urartuSetaria italica17.1620.995.7170forward
CNT30727469Triticum urartuCorchorus capsularis18.8725.3392.2177forward
CNT30185973Triticum urartuSecale cereale67.410096275forward
CNT30307716Triticum urartuTriticum aestivum74.5110096.05304forward
CNT30227167Triticum urartuHordeum vulgare73.7797.194.02301forward
CNT30398049Triticum urartuTriticum turgidum90.210098.37368forward
CNT30443279Triticum urartuAegilops tauschii74.5110095.72304forward
CNT30669067Triticum urartuTriticum dicoccoides74.5110096.71304forward
CNT3015222Triticum urartuZea mays18.3825.3490.6775forward
CNT30339268Triticum urartuEragrostis tef17.6524.5795.8372forward

Expression of CNT30689289

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MWQAQREAGFTEQRQLPASNGGRITGRCTPWPLGPRSLLQWTITFLCVSFFQPSRQWL*

Sequence

>CNT30689289
CTCTTCACTCGCCGAGCTCAGTTGTGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGTGTTGCGGGCCTGGTCTGGGTGT
GCTACTGCTGGCCCGCCCGTTCCAAGTTGTGTAGTGGACCACCTGGGGCCTATGCGAAAGCTGAGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAG
GCTGGCTTCACAGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTTGGCCGCTTGGGCCTCGCAGCCTACTCCAGT
GGACCATCACTTTTTTGTGCGTGTCTTTTTTCCAACCATCACGACAGTGGTTGTGAGGTTGATTTTGACCTAGTCAGTGTTTCTTCTATTTCACCTTTTT
GTGCTTTG