Detailed information on CNT30185973


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703316Secale cerealeQuercus lobata25.4522.891.4370forward
CNT30727469Secale cerealeCorchorus capsularis2825.3393.5177forward
CNT30227179Secale cerealeHordeum vulgare10097.1795.27275reverse complement
CNT30398049Secale cerealeTriticum turgidum98.5573.6496.68271forward
CNT30561830Secale cerealeActinidia chinensis23.6421.3192.3165reverse complement
CNT30443416Secale cerealeAegilops tauschii10090.4696.36275forward
CNT30689289Secale cerealeTriticum urartu10067.496275forward
CNT30368744Secale cerealeSorghum bicolor87.6466.5789.21241forward
CNT30148640Secale cerealeBrachypodium distachyon100.7390.8291.34277forward

Expression of CNT30185973

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MWQAQREAGFTEQRQLPAFNGGRITGRCTPRPLGPRSL

Sequence

>CNT30185973
CAGTTGCGTGAGCTTGTAACCCGAGTGGGGGCATTAAAGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTCTGGGTGTGCTACTGCTGGCCCGCCC
GTTCCAAGTTGAGTAGTGGACCGGCTGGGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAGCAG
CGACAACTGCCCGCTTTCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTCGGCCGCTTGGGCCTCGCAGCCTA