Detailed information on CNT30227167


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30304944Hordeum vulgareTriticum aestivum96.4598.3695.65299forward
CNT30391653Hordeum vulgareTriticum turgidum94.1996.6994.86292forward
CNT30442798Hordeum vulgareAegilops tauschii96.4598.3694.65299forward
CNT30689289Hordeum vulgareTriticum urartu97.173.7794.02301forward
CNT30148640Hordeum vulgareBrachypodium distachyon94.5296.0791.13293forward

Expression of CNT30227167

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MWQAQREAGFTEQRQLPASNGGRITDRCTP*

Sequence

>CNT30227167
GCTCAGTAGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGCTGTTGTAGCGCTGCGGGCCTGGTTTGGGTGTGCTACTGCAGGCCCA
CCCGTTCCAAGTTGCGTAGTGGACGGCCTGGGGCCCATGCGAAAGCTGGGCCTCAAGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCACAGAG
CAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGACCGCTGCACTCCTTGACCGCTTGGGCCTCGCAGCCTACTCCAGCGAACCATTACTTTTT
TCAAAATTTT