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Detailed information on CNT30686878


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 4e-177

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189796Triticum urartuSecale cereale97.0379.7794.56883forward
CNT30300930Triticum urartuTriticum aestivum88.6880.4686.86807forward
CNT30225559Triticum urartuHordeum vulgare99.5681.2693.82906forward
CNT30441267Triticum urartuAegilops tauschii72.7590.5693.81662forward
CNT30244143Triticum urartuAvena sativa86.9281.3888.24791forward
CNT30666302Triticum urartuTriticum dicoccoides57.4710094.65523forward
CNT30139374Triticum urartuLolium perenne92.4295.986.68841forward

Expression of CNT30686878

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MVTRASPKRAKDGTFFTALPAKVEEERDMVAAAIGKLR*

>peptide 2 (38 aa)
MPQGLRPSQEGRSCRLGRVGRRSHRVGRRQRGTPRRHP*

>peptide 3 (54 aa)
RASWRAQSQDTLLAGDKVGGKCPCIVVDGVGDVVSEILKWALARDDSLDKEAKH*

>peptide 4 (89 aa)
NAPHGEHSLKTPYLPGTKLVANAHALLLTGSAMWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

>peptide 5 (29 aa)
MAQRQWITSNSRFLEKVSGSAESPAVSHP*

Sequence

>CNT30686878
AACGCGCCTCATGGCGAGCACAGTCTCAAGACACCTTACTTGCCGGGGACAAAGTTGGTGGCAAATGCCCATGCATTGTTGTTGACGGGGTCGGCGATGT
GGTCAGCGAGATTCTCAAGTGGGCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCAAACATTGAGAACATGGCAAGGCGACCGTTCTTGATCTCCTT
CACCTTGAGCTCGGCGAATGCCTCAGGGTCTTCGGCCAAGCCAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCG
CCGGCAACGCGGTACCCCTCGACGGCACCCATGAGCACGACCTGACATGCCCAAATAGCCAGGATGCTTTGTGCGTGGACAAGGCTGGGGTTGCCAAGGT
AGTCAAGACCACCCTCACTAAAGATTTGAGAGCCGGCCTTGAACCAAACAGCCTCACCGAACTTAACGCCATTGCGGGCGAGCAACTCAGGGAAGACGCA
ACCAAGTGCCCCAAGCATGGCCCAACGACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCAGGGTCAGCCGAAAGTCCGGCTGTGTCCCAC
CCATAGTCACCTGGGAACTCACCTGTCAGGTAGCTTGGGGGCTCACCGGAGAGTGGGCCGAGGTAGAGCACACGGTCAGCACCGTACCATGGGCTGCCAG
AAGAAACCTGCTTCGCCTTTGCTGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCCAAAGATGGAACGTTCTTCACCGCCTTGCCGGCAAA
GGTCGAGGAGGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGATGAGTGTCAACTGTATGGGTTCTCAAAGAGATGAGTGAGTATGGAGATGAT
TTGATAGAAG