Detailed information on CNT30441267


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 4e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189591Aegilops tauschiiSecale cereale89.4766.7393.73654forward
CNT30302216Aegilops tauschiiTriticum aestivum84.9599.6890.02621forward
CNT30225946Aegilops tauschiiHordeum vulgare100100.4192.75731forward
CNT30395723Aegilops tauschiiTriticum turgidum88.7873.1793.68649forward
CNT30244415Aegilops tauschiiAvena sativa68.463.0590500forward
CNT30666302Aegilops tauschiiTriticum dicoccoides71.5510093.69523forward
CNT30137856Aegilops tauschiiLolium perenne79.0752.3187.2578forward
CNT30686878Aegilops tauschiiTriticum urartu90.5672.7593.81662forward
CNT30722304Aegilops tauschiiTriticum spelta53.2199.2392.03389forward

Expression of CNT30441267

Peptides detected in this lncRNA

>peptide 1 (37 aa)
VEAAAWVEWVNDLSEWATGNAVPLDGTHEHDLACPNS*

>peptide 2 (72 aa)
MVTRASPNRAKDGTFFTALPAKVEVERDMVAATIAKLRRVLAVWVLKEMSECGDDLIEEGEVAGYLREHEVS*

>peptide 3 (76 aa)
MDHLQLPVLGEGLGVSRKSGCVPPIITWELTCQVARGLTGERAEVEHTVSTVPWAAGGNLLRLRRGLAHGDAGLTK*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSAESPAVSHP*

Sequence

>CNT30441267
GTCGAAGCTGCCGCCTGGGTAGAGTGGGTCAACGATCTCTCCGAGTGGGCCACCGGCAACGCGGTACCCCTCGACGGCACCCATGAGCACGACCTGGCAT
GCCCAAATAGCTAGGATGCTTTGCGCGTGCACAAGGCTGGGGTTGCCGAGGTAGTCGAGACCACCCTCACTAAAGATTTGGGAGCCGGCCTTGAACCAAA
CAGCCTCACCGAAGGTGACGCCGTTGCGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCCCCGAGCATGGCCCAGCGGCAATGGATCACCTCCAGCTC
CCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGAAAGTCCGGCTGTGTCCCACCCATAATCACCTGGGAACTCACCTGTCAGGTAGCTCGGGGGCTCACCG
GAGAGCGGGCCGAGGTAGAGCACACGGTCAGCACCGTACCATGGGCTGCCGGAGGAAACCTGCTTCGCCTTCGCCGCGGTCTTGCGCATGGTGACGCGGG
CCTCACCAAATAGAGCCAAAGATGGTACATTCTTCACCGCCTTGCCGGCAAAGGTCGAGGTGGAGAGGGACATGGTGGCTGCCACCATTGCAAAGCTAAG
AAGAGTGTTAGCTGTATGGGTTCTCAAAGAGATGAGTGAGTGTGGAGATGATTTGATAGAAGAGGGGGAGGTGGCCGGCTACTTAAGGGAGCATGAGGTG
TCATAGGGAATCCATTTGGTGTGCAATCTGA