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Detailed information on CNT30666302


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 1e-90

BLAST vs NONCODE:
NONBNAT007398, E-value = 1e-28

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30189758Triticum dicoccoidesSecale cereale100.9651.0192.23528forward
CNT30302216Triticum dicoccoidesTriticum aestivum89.6775.2890.19469forward
CNT30225946Triticum dicoccoidesHordeum vulgare10071.8494.07523forward
CNT30395723Triticum dicoccoidesTriticum turgidum99.8158.8596.17522forward
CNT30441267Triticum dicoccoidesAegilops tauschii10071.5593.69523forward
CNT30686878Triticum dicoccoidesTriticum urartu10057.4794.65523forward

Expression of CNT30666302

Peptides detected in this lncRNA

>peptide 1 (68 aa)
VDEAGVAEVIETTLTKDLRAGLEPNSLTEVDAVVGEQLREDTTKCPEHGPAAMDHLQLPVLGEGLGVS*

>peptide 2 (38 aa)
MVTRASPKRAKDGTFVTTLPAKVEEERDMVAAAIGKLR*

>peptide 3 (29 aa)
MAQRQWITSSSRFLAKVSGSAESPAVSHP*

Sequence

>CNT30666302
GCGTGGACGAGGCTGGGGTTGCCGAGGTAATCGAGACCACCCTCACTAAAGATTTGAGAGCCGGCCTTGAACCAAACAGCCTCACCGAAGTTGACGCCGT
TGTGGGCGAGCAACTCAGGGAAGACACAACCAAGTGCCCCGAGCATGGCCCAGCGGCAATGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGG
GTCAGCTGAAAGTCCGGCAGTGTCCCACCCATAGTCGCCTGGGAACTCACCAGTGAGGTAGCTCGGGGGCTCACCAGAGAGTGGGCCGAGGTAGAGCACA
CGGTCAGCACCGTACCATGGGCTGCCAGAAGAAACCTGCTTCACCTTCGTTGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCCAAAGATG
GAACGTTCGTCACCACCTTGCCGGCAAAGGTCGAGGAGGAGAGGGACATGGTGGCTGCCGCCATTGGAAAGCTAAGATGAGTGTCAACTGTATGGGTTCT
CAAAGAGATGAGTGAGTATGGAG