Detailed information on CNT30189796


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 4e-176

BLAST vs NONCODE:
NONSTUT001352, E-value = 2e-32

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30284133Secale cerealeTriticum aestivum72.3657.6387.89801forward
CNT30225559Secale cerealeHordeum vulgare91.5190.8591.611013forward
CNT30686878Secale cerealeTriticum urartu79.7797.0394.56883forward

Expression of CNT30189796

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSNSRFLEKVSGSAESPAVSHP*

>peptide 2 (57 aa)
MWSARFSSGPLPVTIAWTKKPNIENMARRPFLISFTLSSANASGSSAKPRGSKLPPG*

>peptide 3 (51 aa)
MISQQNGQTNARRDMEADKSDRAFAQNPRNLHHGSTTETAQQYASRRAQSS*

>peptide 4 (91 aa)
MVRPMQGATWKRTNRTVLLHKILVIYIMVVQPRLHNNTLHGVHNLLDILLAGDKVGCERPCVVADRVSDVVGEVLKWALARDDSLDKEAEH*

>peptide 5 (50 aa)
MVTRASPKRAKDGTFFTALPAKVEDERDMVVAAIGKLRKVSAVLYGLSKR*

>peptide 6 (38 aa)
MPQGLQPSQEGRSCRLGRVGRRSHRVGRRQRGTPRLHP*

Sequence

>CNT30189796
TCCACCAACATGGTAACAGTTAAGTAAGCGCACAAGAAGTATTTATCTGTTCTCGTGAACCATGATATCACAACAAAATGGTCAGACCAATGCAAGGCGC
GACATGGAAGCGGACAAATCGGACCGTGCTTTTGCACAAAATCCTCGTAATTTACATCATGGTAGTACAACCGAGACTGCACAACAATACGCTTCACGGC
GTGCACAATCTTCTTGACATCTTACTTGCCGGGGACAAAGTTGGTTGCGAACGCCCATGCGTTGTTGCTGACAGGGTCAGCGATGTGGTCGGCGAGGTTC
TCAAGTGGGCCCTTGCCCGTGACGATAGCTTGGACAAAGAAGCCGAACATTGAGAACATGGCGAGGCGACCGTTCTTGATCTCCTTCACCTTGAGCTCGG
CGAATGCCTCAGGGTCTTCAGCCAAGCCAAGAGGGTCGAAGCTGCCGCCTGGGTAGAGTGGGTCGACGATCTCACCGAGTGGGCCGCCGGCAACGCGGTA
CCCCTCGACTGCACCCATGAGCACGACCTGGCATGCCCAAATAGCAAGGATGCTTTGTGCGTGGACGAGACTGGGGTTGCCGAGGTAGTCGAGACCACCC
TCACTAAAGATCTGGGAGCCGGCCTTGAACCAAACAGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAACTCAGGGAAGACGCAACCAAGTGCACCAA
GCATGGCCCAACGACAGTGGATCACCTCCAACTCCCGGTTCTTGGAGAAGGTCTCAGGGTCAGCCGAAAGTCCGGCTGTGTCCCACCCATAGTCACCTGG
GAACTCACCGGTCAAGTAGCTCGGAGGCTCACCGGAGAGTGGGCCGAGGTAGAGCACACGGTCAGCGCCGTACCATGGGCTGCCAGAGGAAACCTGCTTC
GCCTTCGTTGCGGTCTTGCGCATGGTGACTCGGGCCTCGCCAAAGAGAGCCAAAGATGGTACGTTCTTCACCGCCTTGCCGGCAAAGGTCGAGGATGAGA
GGGACATGGTGGTTGCCGCCATTGGAAAGCTAAGAAAAGTGTCCGCTGTGCTGTATGGGTTGTCAAAGAGATGAGTGAGTGTGGAGATGATTTGATAGTA
GAGGGGG