Detailed information on CNT30677994


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30553167Setaria viridisOryza glaberrima25.6516.7389.8989forward
CNT30439196Setaria viridisAegilops tauschii20.7517.5688.8972forward
CNT30361141Setaria viridisSorghum bicolor32.5614.7789.38113forward
CNT30596824Setaria viridisOryza meridionalis21.0411.7689.0473forward
CNT30369883Setaria viridisOryza glumipatula25.6510.1191.0189forward
CNT30101086Setaria viridisOryza rufipogon25.6510.4691.0189forward
CNT30575473Setaria viridisOryza barthii25.6511.1791.0189forward

Expression of CNT30677994

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MGRLRARSVATTEAFFAAMVACGLASASAISLPH*

>peptide 2 (30 aa)
TSSIRVALARHAAYICVTLYRWITEIKDDR*

Sequence

>CNT30677994
ACGTCGTCCATACGTGTAGCGCTAGCTAGGCACGCAGCGTATATATGTGTGACGTTGTATAGATGGATCACAGAAATTAAGGACGATCGCTAGCTTAGCT
TATTCAACCAACCAACCAAACCATTGACGACGACGGACCATAATTAAGTAGCTAGCTACTAGGCATCGATCGATTCAGGAGCACTGGAATCCGGTGGGGA
CGCGCCTGCCGCAGTAGTTCACGAGGAGGCTGAGGTTGATGGGCAGGTTGAGGGCCAGGAGCGTGGCGACCACGGAGGCTTTCTTCGCCGCCATGGTGGC
TTGCGGGCTAGCTAGTGCTTCTGCTATCTCTCTGCCGCACTAGTGGT