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Detailed information on CNT30361141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691960Sorghum bicolorOryza sativa9.0220.4191.369forward
CNT30677994Sorghum bicolorSetaria viridis14.7732.5689.38113forward

Expression of CNT30361141

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MNIYMLHACMHAHDDDSRFVKKHTQNKAKQNKMKAMNEERCVLVA*

>peptide 2 (34 aa)
MGRFRASSEATKATFFAISLPPRTPTYVRSTQQS*

>peptide 3 (43 aa)
IMVFIFIDGDHRRVGSCQLGLFDTIDHTSIDDRSNTNTGRRAR*

Sequence

>CNT30361141
TAATAATGGTATTTATATTCATAGATGGAGACCATCGTCGTGTCGGGTCCTGCCAGCTAGGCCTCTTTGACACGATCGATCATACATCCATCGATGATCG
ATCCAACACAAACACAGGAAGACGCGCGCGATGAACATATATATGCTGCATGCATGCATGCATGCGCATGACGATGATAGCAGATTCGTGAAGAAACACA
CCCAAAACAAAGCAAAGCAAAACAAAATGAAAGCGATGAACGAAGAGCGATGTGTACTAGTAGCTTAGCTTGTACTTGTTGCTGAGACCTGAGAAATCAT
ATAATTATTATTTAGCCCGGCCGGCCTGGTGCAGGCGGGCGTGTGCATATATATCCATGGATCGGGAAACGACGACGATGGAGAGACGACGAGAGGCAGG
CATGCATGCATGCATGCATGGCGACGATGAGATGAGATAGATCAGGAGGAGCACTGGAATCCCGAGGGGACGCGCCTGCCGCAGTAGTTGACGAGGAGGC
TGAGGTTGATGGGGAGGTTCAGGGCCAGCAGCGAGGCCACCAAGGCCACTTTCTTCGCCATCTCGCTACCACCACGTACTCCTACGTACGTACGCAGCAC
ACAGCAGTCGTAGCTTGGTTTCTAGCGTACCTGCAGATCAGACTGCAGGTCGCTAGTGTGTGTGGTACGGTGTGGGTGTGTCTCTGCTGATCTGCTGCCT
GGAACTGCAACTTGTGAGCGGATCGCAGCAGCTTGCTGGGGGTGCTAGCTATTTATAGCCGGCCG