Detailed information on CNT30658121


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179441Triticum dicoccoidesSecale cereale72.1725.7699.35153forward
CNT30385345Triticum dicoccoidesTriticum turgidum10042.66100212forward
CNT30436234Triticum dicoccoidesAegilops tauschii30.1919.2210064reverse complement
CNT30680109Triticum dicoccoidesTriticum urartu10044.07100212forward
CNT30366386Triticum dicoccoidesSorghum bicolor29.729.1893.6563forward
CNT30370159Triticum dicoccoidesOryza glumipatula22.1715.9391.4947forward
CNT30108236Triticum dicoccoidesOryza longistaminata22.175.4491.4947forward
CNT30151616Triticum dicoccoidesBrachypodium distachyon24.5311.1394.2352forward

Expression of CNT30658121

Peptides detected in this lncRNA

>peptide 1 (43 aa)
VGTGFRLLAYEHLVIFQETVGKGTLAGISRRISFMVVLVIKDF*

Sequence

>CNT30658121
CGGTAGGTACTGGTTTTAGGCTCTTAGCCTATGAGCATCTTGTTATCTTCCAAGAAACTGTAGGCAAAGGCACGCTTGCTGGGATCTCCAGGAGGATATC
TTTCATGGTTGTACTGGTCATAAAGGATTTTTGAGTTGGGGTTCTTCAGTGCAGCAACAGTGGCTGGGAGTTCAGCCAACCCAGCATCTTGGTTCCGTGG
AACAAGTGTTTC