Detailed information on CNT30436234


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30179441Aegilops tauschiiSecale cereale99.155.5698.18330reverse complement
CNT30385831Aegilops tauschiiTriticum turgidum10053.5498.5333reverse complement
CNT30658121Aegilops tauschiiTriticum dicoccoides19.2230.1910064reverse complement
CNT30680109Aegilops tauschiiTriticum urartu96.166.5398.75320reverse complement
CNT30151616Aegilops tauschiiBrachypodium distachyon39.9428.4887.97133reverse complement

Expression of CNT30436234

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MLLLDCKLFCTDFLRPYRKDIVYLFWSLLPIYLINKQTYY

Sequence

>CNT30436234
ACCTACAGTTTCTTGGAAGATAACAAGATGCTCATAGGCTAAGAGCCTAAAACCAGTACCTACCGACATATATTATCCACAGGAGTGAATTCCTGTTGCG
CTGTTATTTTGTTTTCAATGTGGCTAGGAGTTTTTGTTTCAGGACTATCGCAACGGTGATCCACTGTTACCTACTGAAGTTCATTTGCAGTGCGAAATAA
TTATTTCTCCTATGTTGCTACTGGATTGCAAGTTGTTTTGTACTGATTTTCTGAGACCCTATCGGAAGGATATTGTATACCTCTTCTGGTCCTTGCTCCC
TATATATTTGATAAATAAGCAAACATACTATTC