Detailed information on CNT30370159


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676412Oryza glumipatulaSetaria viridis15.9323.0493.6247forward
CNT30658121Oryza glumipatulaTriticum dicoccoides15.9322.1791.4947forward
CNT30366386Oryza glumipatulaSorghum bicolor29.1512.5489.5386forward
CNT30108236Oryza glumipatulaOryza longistaminata64.7522.1197.91191forward
CNT30151616Oryza glumipatulaBrachypodium distachyon20.3412.8593.3360forward

Expression of CNT30370159

Peptides detected in this lncRNA

>peptide 1 (49 aa)
RKVTANMAIIVAEQKIFSPNCNKIDSTIGTLTPVQKVDRYREWSQALSL*

Sequence

>CNT30370159
CTCGGAAAGTAACAGCCAACATGGCAATAATCGTTGCGGAACAAAAAATTTTCTCGCCAAACTGTAACAAAATAGACAGCACAATAGGGACTCTCACCCC
AGTGCAGAAGGTAGATAGATATAGAGAGTGGTCTCAGGCTCTTAGCCTATGAGGAGCTTGTTCTCCTCCAAGAAACTGTAGGTAGGGACCTCCAGCATTG
GGGAGAGGAATGCAACCAAGGTGGGTGCAGACGCCAATGACCACTAGCCACTCTGGGTTCTTCACACGCTCTGCGTCCTGCTGGGGATGGCGCAG