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Detailed information on CNT30385345


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30658121Triticum turgidumTriticum dicoccoides42.66100100212forward
CNT30680109Triticum turgidumTriticum urartu96.7810099.79481forward

Expression of CNT30385345

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSVGTGFRLLAYEHLVIFQETVGKGTLAGISRRISFMVVLVIKDF*

>peptide 2 (38 aa)
RIVCLLIYQIYREQGPEEVYNILPIGSQKISIKQLTIQ*

Sequence

>CNT30385345
AAGAATAGTATGTTTGCTTATTTATCAAATATATAGGGAGCAAGGACCAGAAGAGGTATACAATATCCTTCCGATAGGGTCTCAGAAAATCAGTATAAAA
CAACTTACAATCCAGTAGCAACATAGGAGAAACAATTATTTCGCACTGCAAATGAACTTCAGTAGGTAACAGTGGATCACCGTTGCGATAGTCCTGAAAC
AAAAACTCCTAGCCACATTGAAAACAAAATAACAGCGCAACAGGAATTCACTCCTGTCGAGAATATATGTCGGTAGGTACTGGTTTTAGGCTCTTAGCCT
ATGAGCATCTTGTTATCTTCCAAGAAACTGTAGGCAAAGGCACGCTTGCTGGGATCTCCAGGAGGATATCTTTCATGGTTGTACTGGTCATAAAGGATTT
TTGAGTTGGGGTTCTTCAGTGCAGCAACAGTGGCTGGGAGTTCAGCCAACCCAGCATCTTGGTTCCGTGGAACAAGTGTTTCAGCCGAAGAAAAGCC