Detailed information on CNT30644693


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372997Cannabis sativaArabidopsis thaliana21.679.6692.8670forward
CNT30618136Cannabis sativaSesamum indicum20.7411.7892.5467reverse complement
CNT30272829Cannabis sativaChenopodium quinoa24.4625.7391.1479forward
CNT3070208Cannabis sativaQuercus suber26.0132.9490.4884reverse complement
CNT30403379Cannabis sativaBeta vulgaris24.4625.6592.4179forward
CNT3061108Cannabis sativaArabidopsis lyrata20.1228.3895.3865reverse complement

Expression of CNT30644693

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MREAGFTEQRIPPALGSGRITGRCYLGPPWFTGPTLIGPFLFLFFSFLF

Sequence

>CNT30644693
CCTAGTAGCGTGGGTCTGTAATCCAAGTGGAGGCATGTGGGAAATGGGACATTAGGTTGGTTCAGTGGGCTGGATTCAGTGTTAGCTGTTTACTGGCCTG
CCCGTTCCAAGCTGGGAGTTGGGCCTTGTGGTTTGGACGAAAGTCCGGCCCACTGGGCTCCTAAAAGTGGAGGGTAATGCGTGAGGCTGGTTTCACAGAG
CAGCGAATACCTCCCGCTCTCGGCAGTGGAAGGATAACGGGCCGGTGCTACCTGGGTCCACCATGGTTCACTGGGCCGACCTTAATAGGACCATTTCTTT
TTTTATTTTTCTCTTTTTTATTT