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Detailed information on CNT30618136

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30535409	Sesamum indicum	Eucalyptus grandis	14.41	28.57	90.24	82	forward
CNT30315642	Sesamum indicum	Corylus avellana	25.66	30.29	83.56	146	reverse complement
CNT30547454	Sesamum indicum	Ipomoea triloba	25.48	44.21	84.14	145	reverse complement
CNT30703316	Sesamum indicum	Quercus lobata	12.48	23.13	91.55	71	reverse complement
CNT30501219	Sesamum indicum	Coffea canephora	16.52	29.65	87.23	94	forward
CNT30727290	Sesamum indicum	Corchorus capsularis	13.53	25.25	90.91	77	reverse complement
CNT30379424	Sesamum indicum	Manihot esculenta	12.83	24.09	89.04	73	reverse complement
CNT30506771	Sesamum indicum	Nicotiana attenuata	11.25	20.98	92.19	64	reverse complement
CNT30711674	Sesamum indicum	Glycine max	13.88	25.99	89.87	79	reverse complement
CNT3046251	Sesamum indicum	Prunus dulcis	28.82	54.49	86.59	164	reverse complement
CNT3095958	Sesamum indicum	Solanum tuberosum	11.6	21.78	90.91	66	reverse complement
CNT30588944	Sesamum indicum	Musa acuminata	14.06	24.24	91.25	80	forward
CNT3084184	Sesamum indicum	Vigna radiata	12.3	22.95	88.57	70	reverse complement
CNT30544072	Sesamum indicum	Brassica napus	12.48	23.51	91.55	71	reverse complement
CNT30313675	Sesamum indicum	Camelina sativa	11.78	22.64	89.55	67	forward
CNT3059454	Sesamum indicum	Arabidopsis lyrata	11.78	22.11	92.54	67	reverse complement
CNT30652801	Sesamum indicum	Rosa chinensis	28.82	53.59	85.98	164	reverse complement
CNT30128358	Sesamum indicum	Corymbia citriodora	14.94	30.8	87.06	85	forward
CNT30716661	Sesamum indicum	Malus domestica golden	28.12	51.61	86.88	160	reverse complement
CNT30477933	Sesamum indicum	Arabidopsis halleri	11.78	22.11	92.54	67	reverse complement
CNT30154450	Sesamum indicum	Prunus persica	28.82	53.77	87.2	164	reverse complement
CNT30409088	Sesamum indicum	Papaver somniferum	13.36	23.24	93.42	76	forward
CNT30572431	Sesamum indicum	Vitis vinifera	14.59	27.04	89.16	83	forward
CNT30644693	Sesamum indicum	Cannabis sativa	11.78	20.74	92.54	67	reverse complement
CNT3053266	Sesamum indicum	Amborella trichopoda	14.76	27.27	88.1	84	reverse complement
CNT3026785	Sesamum indicum	Populus trichocarpa	14.59	27.39	89.16	83	reverse complement
CNT30726065	Sesamum indicum	Lupinus angustifolius	10.9	20.13	93.55	62	reverse complement

Expression of CNT30618136

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MREKSDCPIRTNPTSFNGSKQHQPVILPLQRAGSSRCSVKPA*

>peptide 2 (52 aa)
MKPRPTPKHHGPTPHLERAGQNYAAGIQPAESTQRPVTLMPPLGLQARVTELG

>peptide 3 (29 aa)
MAQLPTWRGRARIMPLESSQPNRPNVQSP*

Sequence

>CNT30618136
ATGAGAGAAAAAAGTGATTGTCCAATTAGAACCAACCCAACTAGCTTTAATGGATCCAAGCAGCACCAACCTGTTATCCTTCCACTGCAGAGAGCGGGAA
GTAGTCGTTGCTCTGTAAAACCAGCCTAACGCGTTGCCCTCCACTCTAAGAGCCATGAAGCCTAAGCCTTCGCCCAAGCACCATAGCCCAACTCTCCGCT
TGGAACGGGCAGGCCAGAATTAAGCTACTAGAATCCAGCCAGCCAAATTGGCCCAACATCCAATCACCCTAGTGCCCCCACTTGGGGCCAGCCCAACTGA
CTTTATTGGATCCAAGCGGCGCCGGCTCGTTATCCTTCCACTGCAGAGAGCGGGAGGTGATCGCTGCTCTGTGAAACCAGCCTGACGCGGTGCCCTCCGC
TCTAAGGGCCATGAAGCCCAGGCCTACGCCCAAGCACCATGGCCCAACTCCCCACTTGGAGAGGGCGGGCCAGAATTATGCCGCTGGAATCCAGCCAGCC
GAATCGACCCAACGTCCAGTCACCTTGATGCCCCCACTTGGGTTACAAGCCCGCGTTACCGAGCTCGGC