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Detailed information on CNT30631068


BLAST search results

BLAST vs Swiss-Prot:
sp|P26969|GCSP_PEA, E-value = 7e-113

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547418Vigna unguiculataIpomoea triloba15.7239.0988.3786forward
CNT30380377Vigna unguiculataManihot esculenta25.2315.5985.51138forward
CNT30711379Vigna unguiculataGlycine max31.9920.1893.14175forward
CNT30565583Vigna unguiculataActinidia chinensis44.7938.2283.27245forward
CNT30661341Vigna unguiculataTriticum dicoccoides22.855083.2125forward
CNT3073588Vigna unguiculataBrassica juncea22.6711.6884.68124forward
CNT30206758Vigna unguiculataHelianthus annuus27.7956.7281.58152forward
CNT30411467Vigna unguiculataPapaver somniferum29.4324.8180.75161forward
CNT30570509Vigna unguiculataVitis vinifera31.2626.7287.13171forward

Expression of CNT30631068

Peptides detected in this lncRNA

>peptide 1 (33 aa)
KLHEDLHSPLELQTSELIPQQYLHPTPQEASTQ*

>peptide 2 (79 aa)
MSMSLLDELPIVQHLTLSPRVLHKHTTHIPRFVINILKICCHNLQIKSSSPCLANINGLRVAVACNGHCLSCSCALIKQ*

>peptide 3 (30 aa)
MDIASAAAVPSSSNEALDMGKPVRSVIMVW*

Sequence

>CNT30631068
GAAAGCTGCATGAGGACCTCCATAGCCCATTGGAACTCCAAACCTCTGAGCTGATCCCACAACAATATCTGCACCCAACTCCCCAGGAGGCTTCAACACA
GTGAGTGCCAACAGATCACTAGCCATAACAACCTTCACCTCATGAGCATGAGCCTTCTTGATGAACTCCCCATAGTCCAACACCTCACCCTCAGTCCCAG
GGTACTGCACAAGCACACCACACACATCCCCAGATTTGTAATCAATATCCTTAAGATCTGCTGTCACAACCTTCAGATCAAATCCAGCAGCCCTTGTCTT
GCAAATATCAATGGTCTGAGGGTGGCAGTTGCTTGCAATGGACATTGCCTCAGCTGCAGCTGTGCCCTCATCAAGCAATGAAGCATTGGACATGGGCAAG
CCAGTGAGGTCAGTTATCATGGTCTGGTAATTCAGCAGTGACTCAAGCCTCCCCTGAGATATCTCAGCCTGGTAAGGAGTGTACTGAGTGTACCAAGCAG
GGTTCTCCATTATGTTCCTCAAGATCACTGGTGGAACATGAGTGTTG