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Detailed information on CNT30411467


BLAST search results

BLAST vs Swiss-Prot:
sp|O49954|GCSP_SOLTU, E-value = 2e-91

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631068Papaver somniferumVigna unguiculata24.8129.4380.75161forward
CNT30565584Papaver somniferumActinidia chinensis28.0426.2681.32182forward

Expression of CNT30411467

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMMMKNAHHQNVAVSTRIAGVSESPDLRVS*

>peptide 2 (56 aa)
MDSILMDLGTVASIKDSILSKPTDSDILVCSSGVAELCLLANVSLGFNDSTEINLI*

Sequence

>CNT30411467
TCCTTCATCAAGAAGTGAAGCATTCGACATCGGCAAACCGGTAAGATCCGTAATGACAGTCTGATAATTAAGCAAAGATTCAAGCCTACCTTGAGATATC
TCAGCTTGATATGGAGTATACTGAGTATACCAACCAGGGTTTTCCATAATATTTCTCAAAATCACAGCAGGCACAGAAGTATTGTAATAACCCATACCAA
TAAACGACTTAAAAACCTTATTTTTATCAGCTAACATCTTCATATGATCAATCATTTGGGATTCAGTTAAACCTTGATCGAATTTAGAAAACTTCATGGA
TTCAATTCTTATGGATTTGGGCACAGTAGCATCAATTAAAGACTCGATACTATCAAAACCAACAGATTCAGACATTTTAGTTTGCTCCTCTGGGGTTGCT
GAGTTATGTCTCCTAGCAAATGTATCACTGGGTTTTAACGATTCGACAGAAATCAATCTAATCTGATGGTTTTTCTTCATCAAAACATCATTTGGTGATG
ATGATGATGAAGAATGCACACCACCAGAACGTTGCTGTTTCGACTCGGATAGCAGGCGTTTCAGAATCGCCCGATTTGCGAGTCTCCTAGCACGCTCCAT
TTTCAGAGAGGAGAGAGAAAAATGAGAGATTTACAGAGAGAGATGAAGA