Detailed information on CNT30661341


BLAST search results

BLAST vs Swiss-Prot:
sp|O49954|GCSP_SOLTU, E-value = 3e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631068Triticum dicoccoidesVigna unguiculata5022.8583.2125forward
CNT30711379Triticum dicoccoidesGlycine max38.411.0782.2996forward
CNT30222970Triticum dicoccoidesHordeum vulgare33.237.2295.1883forward
CNT30565584Triticum dicoccoidesActinidia chinensis29.610.6887.8474forward
CNT3073588Triticum dicoccoidesBrassica juncea50.811.9685.83127forward

Expression of CNT30661341

Peptides detected in this lncRNA

>peptide 1 (40 aa)
SKPVARVWQMSMVCGWQLDAMRKVFFLDLTMPRRWTWAGR*

>peptide 2 (48 aa)
VEAGGTRLADVDGLRVAVGCDEEGLLLGLDDAEALDMGRPVRSATMVW*

Sequence

>CNT30661341
TGTCGAAGCCGGTGGCACGCGTCTGGCAGATGTCGATGGTCTGCGGGTGGCAGTTGGATGCGATGAGGAAGGTCTTCTTCTTGGACTTGACGATGCCGAG
GCGTTGGACATGGGCAGGCCGGTGAGGTCAGCGACCATGGTCTGGTAGTTGAGCAGCGACTCGAGACGGCCCTGCGCGATCTCCGCCTGGTAGGGCGTGT
ACTGCGTGTACCACGCGGGGTTCTCCATGAGGTTCCGCAGTATGACGGCC