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Detailed information on CNT30565583


BLAST search results

BLAST vs Swiss-Prot:
sp|P49362|GCSPB_FLAPR, E-value = 4e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631068Actinidia chinensisVigna unguiculata38.2244.7983.27245forward
CNT30206758Actinidia chinensisHelianthus annuus33.780.678.7216forward
CNT30570509Actinidia chinensisVitis vinifera45.8745.9488.1294forward

Expression of CNT30565583

Peptides detected in this lncRNA

>peptide 1 (44 aa)
LRICCSLVCIAIRRAGFPEESTLTPIILPGIILLYSWEVARKAA*

>peptide 2 (31 aa)
MRTTIPHRNPKPLSRANNNIHTEFTRRLQHR*

Sequence

>CNT30565583
CTCCGAATATGTTGCTCCCTTGTCTGCATTGCCATACGCAGGGCAGGTTTTCCTGAAGAATCAACGCTCACCCCGATAATTCTTCCTGGCATCATCCTCT
TGTACTCTTGGGAAGTGGCCAGGAAAGCTGCATGAGGACCACCATACCCCATCGGAACCCCAAACCTCTGAGCCGAGCCAACAACAATATCCACACCGAA
TTCACCAGGAGGCTTCAACATCGTTAAGGCCAAAAGATCACTCGCCATAACAACCTTAACCCCTTTTGCGTGTGCGTTCTTAATGAACTCCCCGTAGTCC
AAAACTTCACCCTCAGTTCCCGGATACTGTACCAGTACCCCGCAAACATCCCCAGACTTGTAATCAAAGTCTTTGAGATCAGAAACAACTACTTTAAGAT
CAAAACCGTCGGCCCTAGACGCGTTTGACATGGGCAGGCCAGTAAGATCCGAAATCATCGTTTGGTAATTAAGCAGGGACTCAAGACGACCCTGCGCAAT
CTCAGCCTGGTACGGCGTGTACTGGGTGTACCAACCCGGATTCTCCATAATGTTCCTCAAAATCACAGGCGGAACAGAGGTGTTATAGTAGCCCATCCCA
ATGAAAGACTTGTAAACCTTATTCATAGAAGCCAATTTCTT