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Detailed information on CNT30630760


BLAST search results

BLAST vs Swiss-Prot:
sp|P35512|PALY_MALDO, E-value = 1e-117

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3096043Vigna unguiculataSolanum tuberosum20.1315.2283.55152forward
CNT30510882Vigna unguiculataSolanum lycopersicum19.638.5483.78148forward
CNT30173113Vigna unguiculataTrifolium pratense8.4828.5792.1964forward
CNT30144087Vigna unguiculataMedicago truncatula21.7248.8187.8164forward
CNT30620237Vigna unguiculataCajanus cajan49.443.3790.35373forward
CNT3024838Vigna unguiculataPopulus trichocarpa20.5312.681.29155forward
CNT30113881Vigna unguiculataFicus carica25.9618.2583.67196forward

Expression of CNT30630760

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MQSFGRSMCSSSSHSLHWPMHTCTLYQQLSTSLSHKIWKGEVLH*

>peptide 2 (40 aa)
MIFPWHMAVNTLSHSSPGEITFSPVSNDVPNSSLTNLYNG*

>peptide 3 (39 aa)
LKVVCGLICHRLTDKPNSYQHKYVYRKKPLFIKIQKMIN*

>peptide 4 (41 aa)
MAWQSATRKVEDISFRISTASLVFLDEINPKEFTSWLCCSAL

Sequence

>CNT30630760
CCTGAAAGTTGTATGTGGATTGATTTGCCACAGGCTTACAGACAAACCAAATTCTTATCAACACAAATACGTATATAGAAAGAAACCACTCTTCATCAAG
ATACAGAAAATGATTAACTAAGAAATTGGAAGAGGAGCACCATTCCACTCTCCAAGGCATTCCAAAAGAGGATCAATGATTTTCCCTTGGCACATGGCAG
TGAACACCTTGTCACACTCTTCACCGGGTGAGATAACCTTTTCACCAGTCAGCAACGATGTCCCTAACTCCTCTCTCACAAACTTGTACAACGGGTAAGA
CCTACATTCCTTGATCTTGTTGGGAATTGCACACTGGTCATTCTCATACGCAAGTCTTGCACCTTCCACTTCCTTAGGCAAGAGGGTCTTCAACTCCTCC
TCAAAAGATGCAATCTTTTGGAAGATCGATGTGTTCAAGTTCTTCTCATTCTCTCCATTGGCCAATGCATACGTGTACTCTCTATCAACAACTTTCAACA
AGTCTTTCTCACAAAATCTGGAAGGGTGAAGTTCTCCATTGACACCTGTGGTGAGAGTCCTCTTGGCAACTTGGCTCACCACATTCTTCACAGTGTTCTT
CAAATTCTCCTCCAAATGCCTCAAGTCAATGGCCTGGCAAAGCGCAACGAGGAAAGTTGAAGACATCAGCTTCAGGATCTCAACAGCCTCGTTGGTTTTC
CTAGACGAAATCAACCCCAAAGAGTTCACATCTTGGTTGTGTTGCTCCGCGCTTT