Detailed information on CNT30173113


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630760Trifolium pratenseVigna unguiculata28.578.4892.1964forward
CNT3095942Trifolium pratenseSolanum tuberosum27.684.7987.162forward
CNT30146797Trifolium pratenseMedicago truncatula97.7741.5689.5219forward
CNT3024838Trifolium pratensePopulus trichocarpa98.2117.8980.91220forward
CNT30113881Trifolium pratenseFicus carica22.324.669050forward

Expression of CNT30173113

Peptides detected in this lncRNA

>peptide 1 (47 aa)
SSSKVAIFWKIDVFEFFSLSPLTKACSTSTCLSFCDKGYVALQGSSI*

>peptide 2 (34 aa)
MSHYKDRQYRKTHAPYQPLSTSLFHRILKDEVLH*

Sequence

>CNT30173113
CTCTTCCTCAAAAGTTGCAATCTTTTGGAAGATTGATGTGTTCGAATTCTTCTCACTTTCTCCATTGACTAAAGCATGTTCTACTAGCACTTGTCTGAGT
TTTTGCGACAAGGGGTATGTCGCACTACAAGGATCGTCAATATAGGAAAACACATGCTCCCTATCAACCACTTTCAACAAGTCTTTTTCACAGAATCTTG
AAGGATGAAGTTCTCCATTGACAC