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Detailed information on CNT30629553


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 4e-109

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-70

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30702989Vigna unguiculataQuercus lobata54.0945.0381.4430forward
CNT30380492Vigna unguiculataManihot esculenta32.0834.8483.92255forward
CNT30525395Vigna unguiculataPhaseolus vulgaris58.8745.9394.02468forward
CNT30562270Vigna unguiculataActinidia chinensis55.9762.3283.82445forward
CNT30539881Vigna unguiculataBrassica napus27.6728.7685.45220forward
CNT3079822Vigna unguiculataBrassica juncea56.646.4481.11450forward
CNT30417231Vigna unguiculataPapaver somniferum44.6547.7282.25355forward
CNT30337693Vigna unguiculataCynara cardunculus58.6262.0583.91466forward

Expression of CNT30629553

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MDQAWVAQVVKPTLTEYLRPSLEPHRLPELHTVPGQQFREHTPQ*

>peptide 2 (35 aa)
MENMANLPFFNSFTFNSAKASGSSARPNGSKLPPG*

Sequence

>CNT30629553
AGGTTCAAAACATGAGATTTTAGTTTTACTCCTTTAGATTTTATAACCTAACTCGCTTTAAGTTTTAGTTAGTTTGGTTAATAAAGCACACAAACAATAG
AGACATGTAATTTATAATGATATAATTCACATTCACTCTAGAAAGACACAATGCATATATTTCACAAAATAGCATAAAATTCACAAGTTCTTTCTTGTTC
TTCTGTGTCACTGTAAGTTCTCTTACTTTCCGGGGACAAAGTTAGTGGCATAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCAAGGTGATCGGCGAGGTT
CTCCAAAGGACCCTTGCCAGTGACAATGGCTTGAACGAAGAAACCAAACATGGAGAACATGGCCAATCTCCCATTCTTCAACTCTTTCACCTTCAACTCA
GCAAAAGCCTCTGGGTCTTCAGCAAGGCCCAATGGGTCGAAGCTCCCACCCGGGTAGATTGGGTCAGTGACCTCACCCAAAGGCCCACCGGCAATGCGAT
AACCCTCCACTGCACCCATCAAGATGACCTGTGTGGCCCAGATGGCAAGGATGCTCTGTGCATGGATCAGGCTTGGGTTGCCCAAGTAGTCAAGCCCACC
CTCACTGAATATCTGAGACCCAGCCTTGAACCACACCGCCTCCCCGAACTTCACACCGTTCCGGGCCAACAGTTCAGGGAACACACACCCCAGTGACGGT
GAAGAGAGAGCCATGGTGGAAGCGGCCATTGCTATATGTTGTAGAATGAAGAAGTGAAAAAGGTTAGTAAAGTGAATGGGTGTTGTTGATGGGAG