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Detailed information on CNT30337693


BLAST search results

BLAST vs Swiss-Prot:
sp|P27492|CB21_TOBAC, E-value = 6e-138

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-75

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548768Cynara cardunculusIpomoea triloba32.4965.7784.84244forward
CNT30404043Cynara cardunculusBeta vulgaris61.1241.6182.57459forward
CNT30629553Cynara cardunculusVigna unguiculata62.0558.6283.91466forward

Expression of CNT30337693

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MGRSYHQGRVGQQSRPRVHLQLCNLQLHPSKSLGWPRWPRCFGHGPNLGFPSNQDHLR*

>peptide 2 (32 aa)
MASLPFLISFTFNSAKASGSSARPNGSKLPPG*

>peptide 3 (79 aa)
MDQTWVSQVIKTTFAEDLCSSLEPYGLTKLHTVTSQEFREDAPKSSKHGPSAVNDLKLTVLGKCFWVSRKSGCVPAVVTW

Sequence

>CNT30337693
AAATAAAATATGCTCTTGTTGTAATCACTGAAGTATAACTGAAATAAATTAAGCAAAAAACTTTTTATTGAAAAAGGAACATTCCCTATTGATGTACAAG
GAAATTAACATGCTCTCAAATCCCTAGAAACCACATTTTTCAAATTTAACATAATATCCTTCTGAAATAAATCACTTTCCGGGGGCAAAGTTTGTGGCAT
AAGACCAGGCGTTGTTGGCAACGGGGTCAGCAAGGTGGTCAGCAAGGTTCTCCAATGGCCCCTTTCCTGTGACAATTGCTTGAACAAAGAAACCAAACAT
AGAGAACATGGCTAGTCTTCCATTCTTGATCTCTTTTACTTTCAACTCAGCAAAAGCCTCTGGATCATCAGCAAGACCCAATGGGTCGAAGCTACCACCA
GGGTAGAGTGGGTCAACAATCTCGCCCAAGGGTCCACCTGCAACTCTGTAACCTTCAACTGCACCCATCAAAATCACTTGGGTGGCCCAGATGGCCAAGA
TGCTTTGGGCATGGACCAAACTTGGGTTTCCCAAGTAATCAAGACCACCTTCGCTGAAGATTTGTGCTCCAGCCTTGAACCATACGGCCTCACCAAACTT
CACACCGTTACGAGCCAAGAGTTCAGGGAAGACGCACCCAAGAGCTCCAAGCATGGCCCATCTGCAGTGAATGACCTCAAGCTCACGGTTCTTGGCAAAT
GTTTCTGGGTCAGCAGAAAGTCCGGCTGTGTCCCAGCCGTAGTCACCTGGG